expected dict | family stringclasses 5
values | fingerprint stringlengths 64 64 | group_id stringlengths 64 64 | id stringlengths 13 13 | index int64 0 20k | input dict | provenance dict | seed int64 20.3M 20.3M | split stringclasses 1
value |
|---|---|---|---|---|---|---|---|---|---|
{
"errors": [],
"gc_count": 20,
"length": 29,
"n_count": 0,
"passed_filter": false,
"quality_sum": 754,
"trimmed_quality": ";;;;;;;;;;;;;;;;;;;;;;;;;;;;;",
"trimmed_sequence": "GGCCCCCCGAAGCGCGGAAGACACACGAT",
"valid_fastq": true
} | quality_boundary | 96d2e1a1197779d688dcc73050693ec9f1be813380179d75adc38549af125779 | d2fc0e922553d3205f1b8c6af636a76ee669cfb2aeebf293afc73a0f1d75631f | READS-0000246 | 246 | {
"fastq": "@synthetic_read\nGGCCCCCCGAAGCGCGGAAGACACACGAT\n+\n;;;;;;;;;;;;;;;;;;;;;;;;;;;;;",
"policy": {
"max_n": 3,
"mean_q_min": 25,
"min_length": 34,
"trim_q_min": 13
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 9,
"length": 19,
"n_count": 0,
"passed_filter": false,
"quality_sum": 682,
"trimmed_quality": "FCIBCD@HGGGCEAGAIAJ",
"trimmed_sequence": "ACGAAGATAACGGGGAACT",
"valid_fastq": true
} | length_boundary | acaa582f21edb52d280dae9fc06d18012e52a350eb7826ff0b12f46e1baddd4d | 74a2be1d3512639990643ebb7f1fd215e56b3e14d6111a4bac0694e299b73dc2 | READS-0000247 | 247 | {
"fastq": "@synthetic_read\nACGAAGATAACGGGGAACT\n+\nFCIBCD@HGGGCEAGAIAJ",
"policy": {
"max_n": 1,
"mean_q_min": 20,
"min_length": 20,
"trim_q_min": 5
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 29,
"length": 68,
"n_count": 2,
"passed_filter": true,
"quality_sum": 2424,
"trimmed_quality": "FBGIDIJ?ADF?CEIADHJCAF@DCD@DEFJCFGEAHFEHAH?I@HJHBFC@GH@BHGBDJAG?JBD@",
"trimmed_sequence": "ATATGAAGGGACACAAGCTAAATGGAAACCGTACTGTTGCAAGACTCTACTGAGTNGCTCNTATCCTG",
"valid_fastq": ... | ambiguous_bases | f9c9e864a771cf959cd0e6a24565e5b332b163146111b4832cd523f81f82f37d | 9045b42d99b409bd3dd2af91df6bba26287177c706f6e7b81c0a6ab15450b5f8 | READS-0000248 | 248 | {
"fastq": "@synthetic_read\nATATGAAGGGACACAAGCTAAATGGAAACCGTACTGTTGCAAGACTCTACTGAGTNGCTCNTATCCTG\n+\nFBGIDIJ?ADF?CEIADHJCAF@DCD@DEFJCFGEAHFEHAH?I@HJHBFC@GH@BHGBDJAG?JBD@",
"policy": {
"max_n": 2,
"mean_q_min": 27,
"min_length": 20,
"trim_q_min": 7
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [
"separator"
],
"gc_count": null,
"length": null,
"n_count": null,
"passed_filter": false,
"quality_sum": null,
"trimmed_quality": null,
"trimmed_sequence": null,
"valid_fastq": false
} | malformed_record | a0458fc77eb63a7027a6f360d69f1c7df3399580235d47106cd07bf43eaa67b0 | 7d65b6d8463ed4405407f811d9b579918f2f790ea03112fe32a0b3033c214e3b | READS-0000249 | 249 | {
"fastq": "@synthetic_read\nCCTGGTCTCAGCGCGCGGAAGCTAATGGATGCCGTGGGTTAGAAA\n-\nAEACHJECAAAI?HAAFDBCHIFJC@BHCGAFHAACBI?@@JEHB",
"policy": {
"max_n": 2,
"mean_q_min": 22,
"min_length": 27,
"trim_q_min": 8
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 32,
"length": 56,
"n_count": 0,
"passed_filter": true,
"quality_sum": 2002,
"trimmed_quality": "DH?AGAH?EJFIAHHDCGFBCBBEIEGJJCCD@JJH?ED@FJBGFAFDABE@FH?H",
"trimmed_sequence": "CCGCGTGCACTCCTGCCCCCTTCGGCGTACCTAGGATCACCTAGCAATAAATCCTA",
"valid_fastq": true
} | clean | 301b2cd1d7878e1b6032505c43cb36c932c09289a400d8855a37025420e61bf4 | b832afe3ec4710b9ac3ce3a6040eae4e4a4755d1e69e21b2de0a421a0c12469c | READS-0000250 | 250 | {
"fastq": "@synthetic_read\nCCGCGTGCACTCCTGCCCCCTTCGGCGTACCTAGGATCACCTAGCAATAAATCCTATCCGT\n+\nDH?AGAH?EJFIAHHDCGFBCBBEIEGJJCCD@JJH?ED@FJBGFAFDABE@FH?H#####",
"policy": {
"max_n": 2,
"mean_q_min": 20,
"min_length": 22,
"trim_q_min": 7
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 36,
"length": 61,
"n_count": 0,
"passed_filter": false,
"quality_sum": 1525,
"trimmed_quality": ":::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::",
"trimmed_sequence": "CACGGCGCAGTACCCGCGTTAACTTGGTCCGTGTGCGTACACGCCAGTAGGTGTACAAGAG",
"valid_fastq": true
} | quality_boundary | e199dae45ec4877971890f80cfbaca734261c0b981a5896b0494c84f686c9040 | aa7b6bdca215e8f996789a34e1295bf1b406ed969b20036a6fe41ac9c060463b | READS-0000251 | 251 | {
"fastq": "@synthetic_read\nCACGGCGCAGTACCCGCGTTAACTTGGTCCGTGTGCGTACACGCCAGTAGGTGTACAAGAG\n+\n:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::",
"policy": {
"max_n": 3,
"mean_q_min": 26,
"min_length": 49,
"trim_q_min": 11
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 14,
"length": 32,
"n_count": 0,
"passed_filter": true,
"quality_sum": 1146,
"trimmed_quality": "IBAC@?HDDG@EAEDECCEEHJBEBHHDJIJE",
"trimmed_sequence": "GATCGATATCGTTAGACAGTGAAGGTTTCCCT",
"valid_fastq": true
} | length_boundary | d9c94a26e6ac7f7d131bb01dbc860efa9f15338ad8fe01ff70bdfc2111822f94 | d47573e4855e9ae466802f400550db1f94d9bab43720f5a483ff0887fba1ed61 | READS-0000252 | 252 | {
"fastq": "@synthetic_read\nGATCGATATCGTTAGACAGTGAAGGTTTCCCT\n+\nIBAC@?HDDG@EAEDECCEEHJBEBHHDJIJE",
"policy": {
"max_n": 3,
"mean_q_min": 19,
"min_length": 31,
"trim_q_min": 5
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 44,
"length": 90,
"n_count": 3,
"passed_filter": false,
"quality_sum": 3206,
"trimmed_quality": "FJEJGHF?IC?H?EAHHFIIDHIBCIAB?DGG@JACIIF?@EFIHD?DHIIBEI@CICBD@H?D?CBEGGBCGHDBDIC@E?EAF?HABI",
"trimmed_sequence": "ATCTTACTTCGGAANGCGGAGAGTCTNGCCAGGCCAAGCAAACCGGNGACGGGTCCTCGTGTCAG... | ambiguous_bases | 5da741b77a0f2ed98034c73ea1dd7e77c14c402faf5a3e910a8417ffb23c8196 | 9db25ea75758eaf756bcb4ed2fb5e23909928fcea8dfdcd22ba7585175c5333f | READS-0000253 | 253 | {
"fastq": "@synthetic_read\nATCTTACTTCGGAANGCGGAGAGTCTNGCCAGGCCAAGCAAACCGGNGACGGGTCCTCGTGTCAGGATTTTAAATCGATAGTATAGCAAC\n+\nFJEJGHF?IC?H?EAHHFIIDHIBCIAB?DGG@JACIIF?@EFIHD?DHIIBEI@CICBD@H?D?CBEGGBCGHDBDIC@E?EAF?HABI",
"policy": {
"max_n": 2,
"mean_q_min": 20,
"min_length": 50,
"trim_q_min": 15
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [
"quality_length"
],
"gc_count": null,
"length": null,
"n_count": null,
"passed_filter": false,
"quality_sum": null,
"trimmed_quality": null,
"trimmed_sequence": null,
"valid_fastq": false
} | malformed_record | bfa9882ab4c42554528a419ce5eb6f90b5a8d268d3d69200486b06006dc95cb2 | ee16cafca1db565edb08ec20a838198ae12ee4a19285ecb8a518b29bf2348843 | READS-0000254 | 254 | {
"fastq": "@synthetic_read\nCTATGATGTAGTCTCCTTCGGGGATGAGCCAAACAGGCTTATGCATTTG\n+\nHFABFAFFIECADEHBDCBCIGGAJGEIDDFBFA@EDC?@CECJJJEF",
"policy": {
"max_n": 2,
"mean_q_min": 20,
"min_length": 39,
"trim_q_min": 10
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 20,
"length": 40,
"n_count": 0,
"passed_filter": false,
"quality_sum": 1426,
"trimmed_quality": "CHHIE??J@BJJBJAEAIF?GDFEHJDA?AHCJDHADA?G",
"trimmed_sequence": "ATGGTACGCCCACGCTTATTCAGCGCTTACCTGCTTTTAG",
"valid_fastq": true
} | clean | 9216fe53fd9165b3e5e983dddd1fe2363353ce9c22af2616bfbeabdb0fa23922 | 71a6c2246ea3b329d0d5ebc03fd3f2e166b8f4931b52ff4c471b40cef76930ea | READS-0000255 | 255 | {
"fastq": "@synthetic_read\nATGGTACGCCCACGCTTATTCAGCGCTTACCTGCTTTTAGCA\n+\nCHHIE??J@BJJBJAEAIF?GDFEHJDA?AHCJDHADA?G##",
"policy": {
"max_n": 1,
"mean_q_min": 21,
"min_length": 43,
"trim_q_min": 6
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 11,
"length": 25,
"n_count": 0,
"passed_filter": false,
"quality_sum": 600,
"trimmed_quality": "9999999999999999999999999",
"trimmed_sequence": "CTACACGCACTCCGACAATGAAAAA",
"valid_fastq": true
} | quality_boundary | c7e43860a11b0a720017721486f2b96eb8732f506192e7c154964691289d96c1 | 4657c03c977756a1eeea68a6036dda86517d53abdd49b751f7c1adc0636ab497 | READS-0000256 | 256 | {
"fastq": "@synthetic_read\nCTACACGCACTCCGACAATGAAAAA\n+\n9999999999999999999999999",
"policy": {
"max_n": 2,
"mean_q_min": 25,
"min_length": 33,
"trim_q_min": 7
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 9,
"length": 23,
"n_count": 0,
"passed_filter": false,
"quality_sum": 816,
"trimmed_quality": "BCJD?AI?JDFJHAC?BDCIGAI",
"trimmed_sequence": "CTTGGGAACATATTACAATCTGG",
"valid_fastq": true
} | length_boundary | dee54a5c799cd65043e44cf9f6086661b82d42ee9e178166de0c6362143a056e | 7f7ea466683cf9e870121c6bee613d29bcc7230267f9b89c70fcc10d09a11ea3 | READS-0000257 | 257 | {
"fastq": "@synthetic_read\nCTTGGGAACATATTACAATCTGG\n+\nBCJD?AI?JDFJHAC?BDCIGAI",
"policy": {
"max_n": 3,
"mean_q_min": 27,
"min_length": 24,
"trim_q_min": 12
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 27,
"length": 55,
"n_count": 2,
"passed_filter": false,
"quality_sum": 1974,
"trimmed_quality": "HI?BADJJ@IJBIHEAICBHEH?ICHJA@I?GAA@DG@IEHF?EJCEDG@EAIHE",
"trimmed_sequence": "CGCTAATTCAGCTTCTACTATGGGCTACAGTAAACCNCATTGGCCCATNGACCCG",
"valid_fastq": true
} | ambiguous_bases | 8144b1ddfd5cf3bb302c24e92cfb29ec5647e8b93a8eaba49080c3734369b9eb | e0e407b0b066f9441491d9ccb544567a4994a5e5b05f6ae7bb80c1ef2383b367 | READS-0000258 | 258 | {
"fastq": "@synthetic_read\nCGCTAATTCAGCTTCTACTATGGGCTACAGTAAACCNCATTGGCCCATNGACCCG\n+\nHI?BADJJ@IJBIHEAICBHEH?ICHJA@I?GAA@DG@IEHF?EJCEDG@EAIHE",
"policy": {
"max_n": 1,
"mean_q_min": 24,
"min_length": 39,
"trim_q_min": 14
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 31,
"length": 65,
"n_count": 3,
"passed_filter": false,
"quality_sum": 2261,
"trimmed_quality": "@DHABFBA?BBHBC?HJF@JIAF@AEEGDAJDDDD@DDHFGCF@@H?AEB?F?BC@FCFEI@DCJ",
"trimmed_sequence": "ACTCAGGCTNGCAAAGCTCAGTGTAACGCAATNTTGGCGGATTACACATNGCACGGGTCAAGTCT",
"valid_fastq": true
... | ambiguous_bases | 364b1e746cd398ef87a5b0eb68dc96fbcb71e86fe7df649a49445be481e5def0 | 41677c469e1f8c8e00fd8ba8f0c22fccebff233847de2c1ef85c1ef7ff5f319f | READS-0000263 | 263 | {
"fastq": "@synthetic_read\nACTCAGGCTNGCAAAGCTCAGTGTAACGCAATNTTGGCGGATTACACATNGCACGGGTCAAGTCT\n+\n@DHABFBA?BBHBC?HJF@JIAF@AEEGDAJDDDD@DDHFGCF@@H?AEB?F?BC@FCFEI@DCJ",
"policy": {
"max_n": 2,
"mean_q_min": 22,
"min_length": 31,
"trim_q_min": 5
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [
"quality_length"
],
"gc_count": null,
"length": null,
"n_count": null,
"passed_filter": false,
"quality_sum": null,
"trimmed_quality": null,
"trimmed_sequence": null,
"valid_fastq": false
} | malformed_record | 60de7e732d6db8884cc4aea15648a75baaad7fc7e2f74b572ddf22b684172f3c | 95e4349d3d9f7eaa842b978ec1c94a97807c0c5dddcb3fa7064003e834f42cf1 | READS-0000264 | 264 | {
"fastq": "@synthetic_read\nGTTGTGGATCGGCGGCTTGGATACTCTCCTTAGAGC\n+\nJJ?EEF?EIJCCEBDIIDJCEAFIJHJB@ECDGFF",
"policy": {
"max_n": 1,
"mean_q_min": 22,
"min_length": 23,
"trim_q_min": 5
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 22,
"length": 41,
"n_count": 0,
"passed_filter": true,
"quality_sum": 1472,
"trimmed_quality": "IHDII???@@IHEBCE@IFCD@J@JC?HJBEFGJCFCJFJC",
"trimmed_sequence": "ACCCGTCCTGAGCTAAACTTCGCTTCTACTCGTACCCGCAT",
"valid_fastq": true
} | clean | b1511bf4eff9f853abf980d88fce8ac225b502f6e129d25f19fead19b3cae2ce | 462fcbe8f6af74d9120f31f4e3ec65833afb0ff9fc6c97c65fd5095ff53d26ca | READS-0000265 | 265 | {
"fastq": "@synthetic_read\nACCCGTCCTGAGCTAAACTTCGCTTCTACTCGTACCCGCATGG\n+\nIHDII???@@IHEBCE@IFCD@J@JC?HJBEFGJCFCJFJC##",
"policy": {
"max_n": 0,
"mean_q_min": 23,
"min_length": 28,
"trim_q_min": 12
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 16,
"length": 31,
"n_count": 0,
"passed_filter": true,
"quality_sum": 1100,
"trimmed_quality": "?JGIJ??A@F?HIJ@CAB?GAEBEEJIBHFH",
"trimmed_sequence": "TAAGAGCGTGCACGCTCATGGTCTAAGTCCT",
"valid_fastq": true
} | length_boundary | d4e68b8409714b0ca27eb610eed7bcd691d05a6aed2fec2c470111f9fd6150f7 | b9a8426635ed00e168189aee8760f549857662b87c193abc131f12f3bc2ccb99 | READS-0000267 | 267 | {
"fastq": "@synthetic_read\nTAAGAGCGTGCACGCTCATGGTCTAAGTCCT\n+\n?JGIJ??A@F?HIJ@CAB?GAEBEEJIBHFH",
"policy": {
"max_n": 2,
"mean_q_min": 26,
"min_length": 30,
"trim_q_min": 6
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 18,
"length": 31,
"n_count": 3,
"passed_filter": false,
"quality_sum": 1055,
"trimmed_quality": "DE?CHAD@AHDDDCAFDCA?D?E@HC?FAEB",
"trimmed_sequence": "CGCCNTTTCGNGGGAGCTGCNGCTCTTACAG",
"valid_fastq": true
} | ambiguous_bases | 1086200ce943ca3bf158d753c6d99935e2b64e197f7f91e11d4475debdf9f62c | 93f777773b04ded03629ba55474d7cf8ee12e90b0bb959c9b810ea2d93c89715 | READS-0000268 | 268 | {
"fastq": "@synthetic_read\nCGCCNTTTCGNGGGAGCTGCNGCTCTTACAG\n+\nDE?CHAD@AHDDDCAFDCA?D?E@HC?FAEB",
"policy": {
"max_n": 3,
"mean_q_min": 20,
"min_length": 48,
"trim_q_min": 8
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [
"quality_length"
],
"gc_count": null,
"length": null,
"n_count": null,
"passed_filter": false,
"quality_sum": null,
"trimmed_quality": null,
"trimmed_sequence": null,
"valid_fastq": false
} | malformed_record | 91bc3a47e69e676bf9a1dc7bf0adf6d7d08ec8d1dc8cc125321789fa409f6855 | ac46640283787f0722b9eb2e8754eb4247da416310fc3090f035596e0507aad8 | READS-0000269 | 269 | {
"fastq": "@synthetic_read\nATCAAATGACCATTGAAGTGGAAGCAAAAGCATACGTGAGGCCGAGTAGTTATTTTTGAGCGAGTTGCTAGCGGTAA\n+\nFHCAHDJDB@CDAJCCC@CAAIGBBGIG@GFJGFCHGFC@DFCBBJAJ??GDHAJD@C@DHDGI?HE@IFDADDEF",
"policy": {
"max_n": 3,
"mean_q_min": 27,
"min_length": 29,
"trim_q_min": 8
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 18,
"length": 34,
"n_count": 0,
"passed_filter": true,
"quality_sum": 1211,
"trimmed_quality": "BHEFFHHCFCG@@IBCCC@GJ@@?ICI?H@IFJF",
"trimmed_sequence": "CGGGTGAGCGAGAATATGCGTGAACAATGGACAG",
"valid_fastq": true
} | clean | 8d17c66b5d8af06a5ec751ac80ff64bb6be28391afe7653b45cf93601e9368b1 | 876c39fc24d06aefd59d541c1b08f166809c1baa68ec91820cc7bb4eae1a7e00 | READS-0000270 | 270 | {
"fastq": "@synthetic_read\nCGGGTGAGCGAGAATATGCGTGAACAATGGACAGAA\n+\nBHEFFHHCFCG@@IBCCC@GJ@@?ICI?H@IFJF##",
"policy": {
"max_n": 0,
"mean_q_min": 26,
"min_length": 28,
"trim_q_min": 7
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 20,
"length": 32,
"n_count": 0,
"passed_filter": false,
"quality_sum": 672,
"trimmed_quality": "66666666666666666666666666666666",
"trimmed_sequence": "GCCATGAGGGTCATCTGCCCGGTCAGCAAACG",
"valid_fastq": true
} | quality_boundary | 69cd9c2461a112d34a010361ebd4d028e94e3c0c98243ab6198e4e7a9706c330 | 55fe4e305d39616a4d9cf2c2d7352c03246a16a82e348adc9b800a7383c9e9c9 | READS-0000271 | 271 | {
"fastq": "@synthetic_read\nGCCATGAGGGTCATCTGCCCGGTCAGCAAACG\n+\n66666666666666666666666666666666",
"policy": {
"max_n": 0,
"mean_q_min": 21,
"min_length": 40,
"trim_q_min": 10
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 28,
"length": 45,
"n_count": 0,
"passed_filter": true,
"quality_sum": 1619,
"trimmed_quality": "DEGIHFE@CJGJBACAAGIGJBHFC??G?JFFBHCCCCJHJD@FD",
"trimmed_sequence": "TCAGCTGTCTGCGCAAGTACGGGGGAGATGCGCGACACATGTCCG",
"valid_fastq": true
} | length_boundary | 65a6c0fdafbd0c4d4c61af73795026f7ebb8079b667a55030da14a3cf800c463 | 3cc8961f2fea898a48be43200100eff7b6af5e3603cb3f02c9c4ef36cfffcb0e | READS-0000272 | 272 | {
"fastq": "@synthetic_read\nTCAGCTGTCTGCGCAAGTACGGGGGAGATGCGCGACACATGTCCG\n+\nDEGIHFE@CJGJBACAAGIGJBHFC??G?JFFBHCCCCJHJD@FD",
"policy": {
"max_n": 2,
"mean_q_min": 24,
"min_length": 45,
"trim_q_min": 15
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 21,
"length": 35,
"n_count": 3,
"passed_filter": false,
"quality_sum": 1269,
"trimmed_quality": "?CFHDHGF@DBDEIJGCBJH?GFHIFD?IDJBHDD",
"trimmed_sequence": "NGCCATGAAGGTGAGCCGGAGGAAGGTCNNGCTCG",
"valid_fastq": true
} | ambiguous_bases | 06c9dd3529ec6782f0fbf1f448da86736d38729848bf2b069eb3067539f4706e | 774f998c37022d33b4d04f4d74c234848f8ba22cd0a65957145218308554a514 | READS-0000273 | 273 | {
"fastq": "@synthetic_read\nNGCCATGAAGGTGAGCCGGAGGAAGGTCNNGCTCG\n+\n?CFHDHGF@DBDEIJGCBJH?GFHIFD?IDJBHDD",
"policy": {
"max_n": 2,
"mean_q_min": 19,
"min_length": 49,
"trim_q_min": 6
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [
"header"
],
"gc_count": null,
"length": null,
"n_count": null,
"passed_filter": false,
"quality_sum": null,
"trimmed_quality": null,
"trimmed_sequence": null,
"valid_fastq": false
} | malformed_record | 305e691fcd6ac689bdc88141d26c616fc22e1bed2f8685beb220fee8e5733ce6 | 15fd5c9c2880ea7a5aa7187c2aced10edc19db82d6f19f939e047d0f12b2b0d1 | READS-0000274 | 274 | {
"fastq": "synthetic_read\nCTAATTGCCTGGACATATGTTCTGGTTAACTCCACAGTAAACTCGACCAGTCT\n+\n?HFECBDCBJDCGJJ?@?JIEEHHGEHBJEC@FBB?IEGDGF@@CHFHICACJ",
"policy": {
"max_n": 2,
"mean_q_min": 25,
"min_length": 33,
"trim_q_min": 7
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 17,
"length": 43,
"n_count": 0,
"passed_filter": true,
"quality_sum": 1587,
"trimmed_quality": "D?JCIIJFHACJJHIIJJIEJHDGIFCHECDEGDB@?FHC@BI",
"trimmed_sequence": "CCTGCTTCCTAGTCGGACTGTTTTATACGATTTCAGTACTAAT",
"valid_fastq": true
} | clean | 41c1b8b55ce77b3f61f1a8383c705c2c2e280face34359d4b0e75cda12d14e9f | 17ad56355586347b9f9a90c2f1dd20f00f09f2a1557504fb2c26568dd03f0963 | READS-0000275 | 275 | {
"fastq": "@synthetic_read\nCCTGCTTCCTAGTCGGACTGTTTTATACGATTTCAGTACTAATC\n+\nD?JCIIJFHACJJHIIJJIEJHDGIFCHECDEGDB@?FHC@BI#",
"policy": {
"max_n": 3,
"mean_q_min": 28,
"min_length": 36,
"trim_q_min": 5
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 43,
"length": 84,
"n_count": 0,
"passed_filter": true,
"quality_sum": 2268,
"trimmed_quality": "<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<",
"trimmed_sequence": "ATAACTGGGCATATTGGAGCCCGCCGCTAGATCACTAATAGCGGGAATCTGAACATGCCCCGAGAATAATTG... | quality_boundary | b1eeba9f4d935e3690d4f7d61f3c095cf4263966ad2caa254c404a436ee39300 | 23cb8b1518f58bef9a0575ff3b3287123185649933a5afcab7675ce862617dcb | READS-0000276 | 276 | {
"fastq": "@synthetic_read\nATAACTGGGCATATTGGAGCCCGCCGCTAGATCACTAATAGCGGGAATCTGAACATGCCCCGAGAATAATTGCTTGACCGTCGG\n+\n<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<",
"policy": {
"max_n": 2,
"mean_q_min": 27,
"min_length": 42,
"trim_q_min": 9
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 23,
"length": 48,
"n_count": 0,
"passed_filter": true,
"quality_sum": 1693,
"trimmed_quality": "@@??DCEDAHGDHJGBF?JB@@BADDBDIDEEAFFJIFCGFAEJEEAF",
"trimmed_sequence": "GGGTCCGAGTCGATGTCGTCTATCTCGTTGCTAGCTTCATTCAACAAT",
"valid_fastq": true
} | length_boundary | 52d2c33f6411f3a2a43fe5d5f33e43ac62de96288f450bddab6a2cc93ba5c0fc | c67a3de6d43c83375b2c0372aefdc60fe54d35e6de99264b76785fc75a1643cf | READS-0000277 | 277 | {
"fastq": "@synthetic_read\nGGGTCCGAGTCGATGTCGTCTATCTCGTTGCTAGCTTCATTCAACAAT\n+\n@@??DCEDAHGDHJGBF?JB@@BADDBDIDEEAFFJIFCGFAEJEEAF",
"policy": {
"max_n": 1,
"mean_q_min": 24,
"min_length": 48,
"trim_q_min": 15
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 15,
"length": 34,
"n_count": 2,
"passed_filter": false,
"quality_sum": 1242,
"trimmed_quality": "HAADI@DCHGFJ?BHCJIFDACDHECIHIJJJCC",
"trimmed_sequence": "TACATAGGGCNNTAAGAAGACCAATATAGCCCCG",
"valid_fastq": true
} | ambiguous_bases | fcf5aedca1a3511e5ed76bb72af81394c32bf8207624cc7cd5e4ae0ad15ba9f8 | c105623c60847fc967c645bc58b8a3327d7ed4ae0ffd3828431a6ab227ffebac | READS-0000278 | 278 | {
"fastq": "@synthetic_read\nTACATAGGGCNNTAAGAAGACCAATATAGCCCCG\n+\nHAADI@DCHGFJ?BHCJIFDACDHECIHIJJJCC",
"policy": {
"max_n": 1,
"mean_q_min": 18,
"min_length": 49,
"trim_q_min": 15
}
} | {
"brand": "RegalFire",
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"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 41,
"length": 80,
"n_count": 0,
"passed_filter": true,
"quality_sum": 2852,
"trimmed_quality": "IG?FEC@DE@EJECI@EGHEHJ@A?HGFJHCEEE?FGFBBHCIFDBC@FDGBEH@CIEGDADA@BJFAEIFC?DCGCIGE",
"trimmed_sequence": "GCACTAATGACGTGCCTCGTCTGGTCGAACTAACCTACAGGGTTAACACGAAGAGGCCTTACGAGCAGTTCTTCCT... | clean | dbd928daa490b9647d52dbc57e8bb3bab4b33ac3029f428714b41c4743ae9e92 | a165f322f4a1fbd9d7c3237c8ac0d58fd2a824c031b0a8c343899038d1a22ca1 | READS-0000280 | 280 | {
"fastq": "@synthetic_read\nGCACTAATGACGTGCCTCGTCTGGTCGAACTAACCTACAGGGTTAACACGAAGAGGCCTTACGAGCAGTTCTTCCTTCAGCTTCT\n+\nIG?FEC@DE@EJECI@EGHEHJ@A?HGFJHCEEE?FGFBBHCIFDBC@FDGBEH@CIEGDADA@BJFAEIFC?DCGCIGE#####",
"policy": {
"max_n": 0,
"mean_q_min": 19,
"min_length": 48,
"trim_q_min": 15
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 11,
"length": 29,
"n_count": 0,
"passed_filter": true,
"quality_sum": 1016,
"trimmed_quality": "C@?@HBFBIGEFAHG?E?FD@G@JC?HDJ",
"trimmed_sequence": "TCCCGATCATCATACATAACACATCTATC",
"valid_fastq": true
} | length_boundary | 32048b12593ac486e069705f1ec046ad4376f0aab6c2e6eccd0a007d8ad2c565 | 7f5d0ff0184256393caa301e235a2ba60117594208e3142eec39a055aacce3f2 | READS-0000282 | 282 | {
"fastq": "@synthetic_read\nTCCCGATCATCATACATAACACATCTATC\n+\nC@?@HBFBIGEFAHG?E?FD@G@JC?HDJ",
"policy": {
"max_n": 2,
"mean_q_min": 28,
"min_length": 29,
"trim_q_min": 5
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [
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],
"gc_count": null,
"length": null,
"n_count": null,
"passed_filter": false,
"quality_sum": null,
"trimmed_quality": null,
"trimmed_sequence": null,
"valid_fastq": false
} | malformed_record | 48259746a89d4a464e9a674fa3f719cba54e5e0cff91d4ee16af22f9f2097f38 | bc99a6dd7c22e572bb9e1414123d920b5a11f10e055bf53ddd29b825d2fda28e | READS-0000284 | 284 | {
"fastq": "@synthetic_read\nCGCTTCATCCGTGCTTGTTCCCTACCTTCACTCAGGCAAATTT\n+\nEEG@IBJGHIGJCGJDBJ??@JAFBH?IJ?EE@AAHJAEG@C ",
"policy": {
"max_n": 3,
"mean_q_min": 21,
"min_length": 23,
"trim_q_min": 14
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 24,
"length": 51,
"n_count": 0,
"passed_filter": true,
"quality_sum": 1122,
"trimmed_quality": "777777777777777777777777777777777777777777777777777",
"trimmed_sequence": "GTCAAAACACGCTAACTGCCCCAGTTCCGACAGCAATTCATGTAATGGATG",
"valid_fastq": true
} | quality_boundary | 2e179e6a040acc096bb9491d7129baf949f767230be9e03ea982b7ac883cb563 | 13b9d0f54b499a832683a9f9e33c88717ee0d71a87682ad3ccdffe49d9e0c787 | READS-0000286 | 286 | {
"fastq": "@synthetic_read\nGTCAAAACACGCTAACTGCCCCAGTTCCGACAGCAATTCATGTAATGGATG\n+\n777777777777777777777777777777777777777777777777777",
"policy": {
"max_n": 0,
"mean_q_min": 21,
"min_length": 35,
"trim_q_min": 6
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 10,
"length": 20,
"n_count": 0,
"passed_filter": true,
"quality_sum": 713,
"trimmed_quality": "EEF?EIJ?B@IICAHIBBEE",
"trimmed_sequence": "CCCGAAACAACCCATACGTT",
"valid_fastq": true
} | length_boundary | d9ccb3aa430a14c0bf9b760016b9fba07004295433add22d516c9c7060f8a51c | 3accc6d202a6b3e7669e108240849c68efc368ffb551d159380fe915e7931622 | READS-0000287 | 287 | {
"fastq": "@synthetic_read\nCCCGAAACAACCCATACGTT\n+\nEEF?EIJ?B@IICAHIBBEE",
"policy": {
"max_n": 3,
"mean_q_min": 26,
"min_length": 20,
"trim_q_min": 14
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 49,
"length": 89,
"n_count": 1,
"passed_filter": false,
"quality_sum": 3203,
"trimmed_quality": "DIBJDE@@CA?GJDJDDGEIJDH@DI@JCFGACFIJEECBA?ECID?JI@IABBDFHCAJFB@CHCBBAHJHGFHFICFI?GGJGDH@H",
"trimmed_sequence": "AACGGAGATTGAACGATCCGTACGGTCACTCGGCGGGGGGTGAGATCGTAGAGAGTCCTGCTCCNC... | ambiguous_bases | 803e0d36e56f8afa5581e4f0d89d596e2e6777122b676c0fce1dc210f78879da | ec40b31e004d5a6632d8e763f22d69074a604f8b99e4f6351c1d442cb433631d | READS-0000288 | 288 | {
"fastq": "@synthetic_read\nAACGGAGATTGAACGATCCGTACGGTCACTCGGCGGGGGGTGAGATCGTAGAGAGTCCTGCTCCNCGCATCTAGTGGTAGGTTTTAGAG\n+\nDIBJDE@@CA?GJDJDDGEIJDH@DI@JCFGACFIJEECBA?ECID?JI@IABBDFHCAJFB@CHCBBAHJHGFHFICFI?GGJGDH@H",
"policy": {
"max_n": 0,
"mean_q_min": 27,
"min_length": 21,
"trim_q_min": 11
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [
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],
"gc_count": null,
"length": null,
"n_count": null,
"passed_filter": false,
"quality_sum": null,
"trimmed_quality": null,
"trimmed_sequence": null,
"valid_fastq": false
} | malformed_record | 43b80ec648443991d9ff62ca7c6987ccfa55d5514a289e7fef34c5a59a06de86 | ccdc715820a9b1759b0e898e3cde3c5247a2ac1d4516feb93e4d75bd7071a7f6 | READS-0000289 | 289 | {
"fastq": "@synthetic_read\nCGTACAAAGAGTTTCTACACTTTGTCTATGTAATCGGCATGCGCGTGCAGCGCCGAAGCGGGCTCAGGAGGGGGTATC\n+\nIIDFDDIEHDAGG@EAJ@I@BBBI?IBBJHEHAC@GECDBGIG?GC@EF?CIHEBA?F?AEAJH@A@GH@GAGHBIH",
"policy": {
"max_n": 0,
"mean_q_min": 24,
"min_length": 36,
"trim_q_min": 5
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 42,
"length": 80,
"n_count": 0,
"passed_filter": true,
"quality_sum": 2797,
"trimmed_quality": "JICFFAG@DEEJ?E@CIIHDCA?HED@IDCF@AC@D?GDBHAIDG@DGDHCE?CFHC@H@@BCHEGDBDDFC?C@BBECC",
"trimmed_sequence": "GTTCGCGCCTAGGTCGAATATTTCGACTCACAAGCCACGGCTACGGAGGCCAGACGCATATACGTGCATTATGTCG... | clean | c6f2837d6b185a69e68c0d4749104de99e852d5cd92522cd533b843296cd684f | 05eb17b9902fab4de35ca3e47b20028353f41e7ca9dadb466a50ba9347cc5c8e | READS-0000290 | 290 | {
"fastq": "@synthetic_read\nGTTCGCGCCTAGGTCGAATATTTCGACTCACAAGCCACGGCTACGGAGGCCAGACGCATATACGTGCATTATGTCGTATCCTGACCG\n+\nJICFFAG@DEEJ?E@CIIHDCA?HED@IDCF@AC@D?GDBHAIDG@DGDHCE?CFHC@H@@BCHEGDBDDFC?C@BBECC#######",
"policy": {
"max_n": 3,
"mean_q_min": 21,
"min_length": 42,
"trim_q_min": 12
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 38,
"length": 77,
"n_count": 0,
"passed_filter": true,
"quality_sum": 1463,
"trimmed_quality": "44444444444444444444444444444444444444444444444444444444444444444444444444444",
"trimmed_sequence": "CTGGGGCTAATTCCGATACTGAGGTGTCCCGTGGGTTCGGATGAGTAACCAACTTCGCATATCTTTACTTACCATCC",... | quality_boundary | ad5070a8f25307a615a49122b047abc0a6a90b8730733469256b79b69731ecf1 | c4ea375dab9d50bf167090a006b68b63f87e35c25e411f05d175c3bb52a275df | READS-0000291 | 291 | {
"fastq": "@synthetic_read\nCTGGGGCTAATTCCGATACTGAGGTGTCCCGTGGGTTCGGATGAGTAACCAACTTCGCATATCTTTACTTACCATCC\n+\n44444444444444444444444444444444444444444444444444444444444444444444444444444",
"policy": {
"max_n": 2,
"mean_q_min": 19,
"min_length": 32,
"trim_q_min": 5
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 15,
"length": 39,
"n_count": 0,
"passed_filter": true,
"quality_sum": 1398,
"trimmed_quality": "DEGCBDBHBB?DE@ABIF@?JHCJBJF?IJEGCDFHHJG",
"trimmed_sequence": "GTAGTGCAGCATTATAATGTCTTCAACGGCCACTATTAA",
"valid_fastq": true
} | length_boundary | 04bc2a52959da0c890aa2f245647217824ff607b9f647ac2827286f5eb776b4d | 26abdf4b54c8690f897558813f323d581b06fd74dd98b50a0607ae9783850055 | READS-0000292 | 292 | {
"fastq": "@synthetic_read\nGTAGTGCAGCATTATAATGTCTTCAACGGCCACTATTAA\n+\nDEGCBDBHBB?DE@ABIF@?JHCJBJF?IJEGCDFHHJG",
"policy": {
"max_n": 2,
"mean_q_min": 28,
"min_length": 39,
"trim_q_min": 9
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 17,
"length": 33,
"n_count": 3,
"passed_filter": false,
"quality_sum": 1213,
"trimmed_quality": "HJHGEJ@GHJFHB?IGCHFAHGHIIJB?AAACJ",
"trimmed_sequence": "TNCNACAGGGAGNTTTCTGGCGTGTCTGCGTTG",
"valid_fastq": true
} | ambiguous_bases | e37c48a897fde8715d6f8c6b8e3cb1ae121dc08f24e4081eec9f60c6fd0376fa | 7171d30496b8ea6ccd4cbc406d2627bf117418437ba22b7346dc13e3e59954a7 | READS-0000293 | 293 | {
"fastq": "@synthetic_read\nTNCNACAGGGAGNTTTCTGGCGTGTCTGCGTTG\n+\nHJHGEJ@GHJFHB?IGCHFAHGHIIJB?AAACJ",
"policy": {
"max_n": 2,
"mean_q_min": 27,
"min_length": 42,
"trim_q_min": 12
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 44,
"length": 85,
"n_count": 0,
"passed_filter": true,
"quality_sum": 2295,
"trimmed_quality": "<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<",
"trimmed_sequence": "GGTCAGCAGACCCGAAGACGGTGGCGACACACTAACGATCCGCGCCTAATTGACAGGCACATATACTTCCT... | quality_boundary | 08af14715b7bd81d05c366b9686277e874792de09c1bb2d964262be1fc5c4734 | 5dfc12f5614a703e31fb7521845537d2a26467cb6482c6a7a61e5a62b8cff93b | READS-0000296 | 296 | {
"fastq": "@synthetic_read\nGGTCAGCAGACCCGAAGACGGTGGCGACACACTAACGATCCGCGCCTAATTGACAGGCACATATACTTCCTAATCACTTCGATAC\n+\n<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<",
"policy": {
"max_n": 3,
"mean_q_min": 26,
"min_length": 42,
"trim_q_min": 7
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 14,
"length": 30,
"n_count": 0,
"passed_filter": false,
"quality_sum": 1096,
"trimmed_quality": "JCEDICHJH?FECGBGIGJAJ?IFD?FHI@",
"trimmed_sequence": "AGGTGGTATGTCTCCTTACGATCAGTCAGT",
"valid_fastq": true
} | ambiguous_bases | 75edc48c90ad11544bb54222af180be0fbeb9b57b989123f541d93c42f57490e | 4f966c3ec38317a7f66251318eed43e2da8fdcbbf45bd7f3307ad01b08ab1e96 | READS-0000298 | 298 | {
"fastq": "@synthetic_read\nAGGTGGTATGTCTCCTTACGATCAGTCAGT\n+\nJCEDICHJH?FECGBGIGJAJ?IFD?FHI@",
"policy": {
"max_n": 0,
"mean_q_min": 25,
"min_length": 33,
"trim_q_min": 5
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 29,
"length": 54,
"n_count": 0,
"passed_filter": false,
"quality_sum": 1026,
"trimmed_quality": "444444444444444444444444444444444444444444444444444444",
"trimmed_sequence": "GACCCATGGTGTAGACATGACGGAGTCAGTGATTCTTTCGGGGTTATGCAGGCG",
"valid_fastq": true
} | quality_boundary | 89d621832272db9a0255e1dad42408c4ea49e3b760f1bcc750f007765d5272bd | 353e54bde9434335755169a17ab198a982c47edd66fe1d26be4e75a7f9a0ff3c | READS-0000301 | 301 | {
"fastq": "@synthetic_read\nGACCCATGGTGTAGACATGACGGAGTCAGTGATTCTTTCGGGGTTATGCAGGCG\n+\n444444444444444444444444444444444444444444444444444444",
"policy": {
"max_n": 1,
"mean_q_min": 20,
"min_length": 25,
"trim_q_min": 14
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 13,
"length": 25,
"n_count": 0,
"passed_filter": true,
"quality_sum": 929,
"trimmed_quality": "EHHIDIJAIJBHHEAC?GJIEFBGI",
"trimmed_sequence": "TGCGATCGGCCGATAACTGCTCTTA",
"valid_fastq": true
} | length_boundary | e169028d67bc00d4faf8076361ae00744d532ad5a8911a11db32dc90ebcec294 | eb7ee4288c8a0a7e69c1fb6f77953a5e5e567cb92f0564d4b91ecf6be1b943bc | READS-0000302 | 302 | {
"fastq": "@synthetic_read\nTGCGATCGGCCGATAACTGCTCTTA\n+\nEHHIDIJAIJBHHEAC?GJIEFBGI",
"policy": {
"max_n": 2,
"mean_q_min": 19,
"min_length": 25,
"trim_q_min": 15
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 34,
"length": 76,
"n_count": 0,
"passed_filter": true,
"quality_sum": 2730,
"trimmed_quality": "FFCGFJJBAGC@IDCJ@AA@FEIFJIIDGDG@CJACDGHDFGHGHDDADBBFHBFEDG@GIEHAEAJ?FCFFBCDC",
"trimmed_sequence": "TCTTTAGTAGAACGTGGCAAGCAGCCGTCTTAGATTCCCATGAATGCGCCATTTTTAGAGTCTAATCACAAGCGGA",
... | ambiguous_bases | e5f9d3d7f34d7aba0e6a7c0ec5e06f9426304980d1b77af7b93a451beb42105e | 3d6276d6d98de93e3f6dd4765b30cbd52609494144761a6e341154c09d3f0a14 | READS-0000303 | 303 | {
"fastq": "@synthetic_read\nTCTTTAGTAGAACGTGGCAAGCAGCCGTCTTAGATTCCCATGAATGCGCCATTTTTAGAGTCTAATCACAAGCGGA\n+\nFFCGFJJBAGC@IDCJ@AA@FEIFJIIDGDG@CJACDGHDFGHGHDDADBBFHBFEDG@GIEHAEAJ?FCFFBCDC",
"policy": {
"max_n": 0,
"mean_q_min": 21,
"min_length": 32,
"trim_q_min": 7
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [
"quality_ascii"
],
"gc_count": null,
"length": null,
"n_count": null,
"passed_filter": false,
"quality_sum": null,
"trimmed_quality": null,
"trimmed_sequence": null,
"valid_fastq": false
} | malformed_record | 50a9c7bc6d1238cb040bc7a6af88206ee39a71de421a7595d7966f2dc7b1a837 | d1f22bf82f87a60c44c2e217ad3264e7937d496a9ba5daca644e0e878eb0eea2 | READS-0000304 | 304 | {
"fastq": "@synthetic_read\nCCTTGGGCTCCGTTCACATTATCCCTACATCAATAGAGCCTAATATCGGCGTCTCTATGCCTAGAACGGG\n+\nIFCDCEF?AABH@EDGDECGIGCIJHC?GBFAJAIGHH@??GACCAI@FDCFDBBGIFEAGADFJIBJD ",
"policy": {
"max_n": 3,
"mean_q_min": 27,
"min_length": 31,
"trim_q_min": 4
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 40,
"length": 72,
"n_count": 0,
"passed_filter": true,
"quality_sum": 2594,
"trimmed_quality": "EAF@DBIHFH@FFBHBJHGGDG@BJDED@BH@ECHAIJJA@IBAJB?DBHIDAAJACJCHGIGGEHGGIDAF",
"trimmed_sequence": "AGTCGCCATCTTGGCCACGTCGTACCTGTCGTCAAAGCGACGTAGTAATATCAGGGCAGCCACCAGTTGTGG",
"valid_... | clean | 97214aa6d48ab32eeaf78550fa88cd39dd4484717412a3e1be6f76d50324ba41 | a6c3e21c6aa52614bbb202ad5fafa4e13ecae3a9eea9ee221cde5e0ffababed0 | READS-0000305 | 305 | {
"fastq": "@synthetic_read\nAGTCGCCATCTTGGCCACGTCGTACCTGTCGTCAAAGCGACGTAGTAATATCAGGGCAGCCACCAGTTGTGGATG\n+\nEAF@DBIHFH@FFBHBJHGGDG@BJDED@BH@ECHAIJJA@IBAJB?DBHIDAAJACJCHGIGGEHGGIDAF###",
"policy": {
"max_n": 3,
"mean_q_min": 19,
"min_length": 47,
"trim_q_min": 10
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 25,
"length": 52,
"n_count": 1,
"passed_filter": true,
"quality_sum": 1863,
"trimmed_quality": "@C@@EGH?IJAHF?EIIJCIBBBHB?@A@@@IDHBJJAHCJJCJHIE?CJDI",
"trimmed_sequence": "GTGACGTTGAAGAATTTGTGTAGACAGCACCCGTCGGACNCTCCCTATTTCA",
"valid_fastq": true
} | ambiguous_bases | 0c9c65c97c2d9f721f3e05a0b9a1f293d47a0ee6044973b9c296c23b38a4d866 | 21abc48f251f0547fe01be757362067b4944be65f65856f08c2c2f21e00784f4 | READS-0000308 | 308 | {
"fastq": "@synthetic_read\nGTGACGTTGAAGAATTTGTGTAGACAGCACCCGTCGGACNCTCCCTATTTCA\n+\n@C@@EGH?IJAHF?EIIJCIBBBHB?@A@@@IDHBJJAHCJJCJHIE?CJDI",
"policy": {
"max_n": 1,
"mean_q_min": 26,
"min_length": 29,
"trim_q_min": 13
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [
"quality_length"
],
"gc_count": null,
"length": null,
"n_count": null,
"passed_filter": false,
"quality_sum": null,
"trimmed_quality": null,
"trimmed_sequence": null,
"valid_fastq": false
} | malformed_record | e81f51d386e68cb916be801f7854367e1f678d1aa306963955f0d5780533778c | ae7429c3ec184010e4ea708f9b90de7964b81e18d4f9f7ac4aa39258782ae213 | READS-0000309 | 309 | {
"fastq": "@synthetic_read\nGCATACCCGATTAACTCTGAGCTTGAGTACGTAAGGACGCATAAGT\n+\nDEIJ?IA@GICAEHCHCCFDBIFFFFFC?CC@C@FBD@FJGBECJ",
"policy": {
"max_n": 3,
"mean_q_min": 19,
"min_length": 31,
"trim_q_min": 15
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 28,
"length": 53,
"n_count": 0,
"passed_filter": true,
"quality_sum": 1862,
"trimmed_quality": "DEDHH?DE@?HAG?@GD@JHEHBCEDE?@GA@CHE@E@AJDGAJEI@EEJBGC",
"trimmed_sequence": "TTAAACCGATCTCGGCCCTCCAAATCGCGTTAATGGCTAGGTGCTTCCCGTAG",
"valid_fastq": true
} | clean | 07c911981e66baa46976b03735de9d7862c57bac5dbbd62d7dda8c2fff13fc1a | f80264cdce2bc686b472915ced69d4b06cdc344e5248ef23524a31453e1fc622 | READS-0000310 | 310 | {
"fastq": "@synthetic_read\nTTAAACCGATCTCGGCCCTCCAAATCGCGTTAATGGCTAGGTGCTTCCCGTAGCACACTT\n+\nDEDHH?DE@?HAG?@GD@JHEHBCEDE?@GA@CHE@E@AJDGAJEI@EEJBGC#######",
"policy": {
"max_n": 2,
"mean_q_min": 26,
"min_length": 43,
"trim_q_min": 10
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 39,
"length": 78,
"n_count": 0,
"passed_filter": false,
"quality_sum": 1326,
"trimmed_quality": "222222222222222222222222222222222222222222222222222222222222222222222222222222",
"trimmed_sequence": "TTAGCGGAGACGTTCTCAAGATCCAACCCCGGATCCAGTGTGCTGTATCTATAGAGTGATATGCCCCGTGCTATCCT... | quality_boundary | 97c81eea7445d7ae712d53205a9e1eba344b63909fd018fc25f0fa48c2e421e5 | 0e794fc68f1a6860387439fa78f98dcf5f0b800379cb3a21b8a355a3546274d0 | READS-0000311 | 311 | {
"fastq": "@synthetic_read\nTTAGCGGAGACGTTCTCAAGATCCAACCCCGGATCCAGTGTGCTGTATCTATAGAGTGATATGCCCCGTGCTATCCTA\n+\n222222222222222222222222222222222222222222222222222222222222222222222222222222",
"policy": {
"max_n": 1,
"mean_q_min": 18,
"min_length": 44,
"trim_q_min": 11
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [
"alphabet"
],
"gc_count": null,
"length": null,
"n_count": null,
"passed_filter": false,
"quality_sum": null,
"trimmed_quality": null,
"trimmed_sequence": null,
"valid_fastq": false
} | malformed_record | 3280cdd9ef53447d52de2b02402c1700b71fe489f2d1718e732fe4aa929b0c1c | c356712f5c24545a38ca0c67d7a7839680f84317bef5c33834d253a802bed0d2 | READS-0000314 | 314 | {
"fastq": "@synthetic_read\nGAGATAGACCCGATGGCAAAGTGAAATTCCCACCTATGAGCTCCACTGTTCGATTCACACAACCGCACATCCTX\n+\nEGDJ?DH??@@HFA@JDHFG@FDJ@JIJB?B??EE@DGJJ@FFECI?FCGIIDDBCDF?JHI@HJDAFJF@@HE",
"policy": {
"max_n": 0,
"mean_q_min": 28,
"min_length": 43,
"trim_q_min": 6
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 14,
"length": 19,
"n_count": 0,
"passed_filter": false,
"quality_sum": 653,
"trimmed_quality": "HAJA@DB??DICBCA@CEJ",
"trimmed_sequence": "TGCGGCCCGAAGCCACCAC",
"valid_fastq": true
} | clean | 2fe9b7e21fae6e341bdb93c9b17dfaec3542ef29275cd4fa76c21a1fffb297b9 | 0dffd42ffbfb9412140767d127eddbb7dcba5a478f7bbe5098f8a9af29618b36 | READS-0000315 | 315 | {
"fastq": "@synthetic_read\nTGCGGCCCGAAGCCACCACTGCTG\n+\nHAJA@DB??DICBCA@CEJ#####",
"policy": {
"max_n": 1,
"mean_q_min": 24,
"min_length": 23,
"trim_q_min": 10
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 18,
"length": 49,
"n_count": 0,
"passed_filter": true,
"quality_sum": 1372,
"trimmed_quality": "=================================================",
"trimmed_sequence": "AGTAGGTGAGACTCACTAGGATTTTTGATCAGAATGTAATGACGAGAAA",
"valid_fastq": true
} | quality_boundary | 9e56d6cb6fe3e969f5bb8fe62ae799ffe3a0559faf33764577e598fd9a93ca26 | ad28a657951f2a833f3518ddf213631c9ee26625e7104482daa8f898c1514df0 | READS-0000316 | 316 | {
"fastq": "@synthetic_read\nAGTAGGTGAGACTCACTAGGATTTTTGATCAGAATGTAATGACGAGAAA\n+\n=================================================",
"policy": {
"max_n": 2,
"mean_q_min": 27,
"min_length": 47,
"trim_q_min": 11
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 13,
"length": 22,
"n_count": 0,
"passed_filter": false,
"quality_sum": 789,
"trimmed_quality": "B?EIAH?BJJBACJBAGHGHHE",
"trimmed_sequence": "TCACCGTACAGTAACCGAGCCC",
"valid_fastq": true
} | length_boundary | 8e2bcd10689ccf66fa61faee0b5daf47b46b05dd1ae7ba0bf6f80f003b65f6c0 | 216740d5e8b64235244c29c91eccf22929929acc043535a226751b4888484ead | READS-0000317 | 317 | {
"fastq": "@synthetic_read\nTCACCGTACAGTAACCGAGCCC\n+\nB?EIAH?BJJBACJBAGHGHHE",
"policy": {
"max_n": 3,
"mean_q_min": 27,
"min_length": 23,
"trim_q_min": 13
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 12,
"length": 27,
"n_count": 1,
"passed_filter": false,
"quality_sum": 941,
"trimmed_quality": "H?DIJBAGC?@BCCJJ@ED@E@@E@JE",
"trimmed_sequence": "TATACAGTGACANTGCCGGCTAAATCC",
"valid_fastq": true
} | ambiguous_bases | bdd031a981e6d9b71196dd8ccb0e2ab2317a7dbe1cb2e9b0ddc85764506a37dd | 67590834e8ae13f68c5834121df3aed6aff71e1a323ceb9cf0d8bd5f8439016b | READS-0000318 | 318 | {
"fastq": "@synthetic_read\nTATACAGTGACANTGCCGGCTAAATCC\n+\nH?DIJBAGC?@BCCJJ@ED@E@@E@JE",
"policy": {
"max_n": 1,
"mean_q_min": 20,
"min_length": 49,
"trim_q_min": 8
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [
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],
"gc_count": null,
"length": null,
"n_count": null,
"passed_filter": false,
"quality_sum": null,
"trimmed_quality": null,
"trimmed_sequence": null,
"valid_fastq": false
} | malformed_record | 8378fc6ad790ded03a5d91047527e1ca904e4bc948eb0182949aa0dcae8c12ea | 0dfbe32f6fa1fd32f5c21f52e32ac807e0df4ba9d5465633fb0d71a925625dc6 | READS-0000319 | 319 | {
"fastq": "@synthetic_read\nTGTATTACCATCAGCTCAAGCACTTATCAACTTGATGGTAAACCGTAATGACGGGGGGTCTGCGT\n+\nICEFEAEHC?GEJHHABIBGJDDGE@BDGFAGHGCF@F?B@DIJ@DJIABBABF?EDIID?@?G",
"policy": {
"max_n": 2,
"mean_q_min": 23,
"min_length": 24,
"trim_q_min": 13
}
} | {
"brand": "RegalFire",
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"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 38,
"length": 86,
"n_count": 0,
"passed_filter": true,
"quality_sum": 3064,
"trimmed_quality": "BIFJHHG?AEDAH?DAFEDFDDCFHHB@@AGHEB@EEFFEGCDC@JI@F@@GDBE?IF?GICEGCJCCAIHFDJG@JCHDECADIE",
"trimmed_sequence": "TATAGGCTAATTTTATCTACGACTTCACTATGGGTCATAGGGACTAAGGGAAGTAAAACATGGGCCAAGA... | clean | fcb8e39105fc39ba99b737049cc6e3a860c2fcaca9df467f26ec695c8364a183 | 64110eb29429a60680eed45209a7d9fd8d5a35bdec981b393291c6bed20b24a3 | READS-0000320 | 320 | {
"fastq": "@synthetic_read\nTATAGGCTAATTTTATCTACGACTTCACTATGGGTCATAGGGACTAAGGGAAGTAAAACATGGGCCAAGATTGGTGCGTTCGGCGTTGTC\n+\nBIFJHHG?AEDAH?DAFEDFDDCFHHB@@AGHEB@EEFFEGCDC@JI@F@@GDBE?IF?GICEGCJCCAIHFDJG@JCHDECADIE####",
"policy": {
"max_n": 2,
"mean_q_min": 22,
"min_length": 34,
"trim_q_min": 10
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 41,
"length": 90,
"n_count": 0,
"passed_filter": true,
"quality_sum": 1890,
"trimmed_quality": "666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666",
"trimmed_sequence": "CTTGGGAACTGCTACGAGTAGGCACTATACGCCACTAGGAGCTTTTGTCTATGTATTATCACCAAG... | quality_boundary | 9e3a5b4af792bd775e02c50c640806e459fe1d3726ad62dd5a0328d755121904 | 34ea9147f6fcdfa26489b979a6b3de0d1d194563139b3abc6337e5367bed32c9 | READS-0000321 | 321 | {
"fastq": "@synthetic_read\nCTTGGGAACTGCTACGAGTAGGCACTATACGCCACTAGGAGCTTTTGTCTATGTATTATCACCAAGCACTACGAATAACAACGTGTGGCT\n+\n666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666",
"policy": {
"max_n": 0,
"mean_q_min": 20,
"min_length": 22,
"trim_q_min": 8
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 17,
"length": 39,
"n_count": 0,
"passed_filter": true,
"quality_sum": 1361,
"trimmed_quality": "F@@BB?AEHEAHH?EEF@HABGGIEAGECADB?AAIEHG",
"trimmed_sequence": "AACCAAGCTATCATTCAGTGATTAAGGCACCTCTGCAGA",
"valid_fastq": true
} | length_boundary | 56ab3abbba114f38482c787e0b197ae9083f1f9cda0d622b2e283f6473e7596d | 60c92225e121247ee56c834f880eee986a5cb2bcef54183b105caa2d0ac44af4 | READS-0000322 | 322 | {
"fastq": "@synthetic_read\nAACCAAGCTATCATTCAGTGATTAAGGCACCTCTGCAGA\n+\nF@@BB?AEHEAHH?EEF@HABGGIEAGECADB?AAIEHG",
"policy": {
"max_n": 1,
"mean_q_min": 26,
"min_length": 39,
"trim_q_min": 4
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 35,
"length": 79,
"n_count": 1,
"passed_filter": false,
"quality_sum": 2836,
"trimmed_quality": "BJFJJJA@?JFAJFJAIAAFIAEHDFADHJEGCGEDGEBBHI?DF@?F@FCJA?IG@AEBF?JHCIIFH@HDEBGFBDE",
"trimmed_sequence": "CGATCATTGGGCTTTATTCCACCTTCANTAGTAGCACCCGTTCGTCCAAACTATCGCGCTATTACTGAACGTTTCG... | ambiguous_bases | b9e42fe6dc31a0bc16b8b55a852d38b56b7ae9378f05c7ebdda5a4f46f340e5d | 158fa124cd6d6cf60ecb2581cbb5231240b6bdc8e1258f277a62c5c6838d0119 | READS-0000323 | 323 | {
"fastq": "@synthetic_read\nCGATCATTGGGCTTTATTCCACCTTCANTAGTAGCACCCGTTCGTCCAAACTATCGCGCTATTACTGAACGTTTCGAAA\n+\nBJFJJJA@?JFAJFJAIAAFIAEHDFADHJEGCGEDGEBBHI?DF@?F@FCJA?IG@AEBF?JHCIIFH@HDEBGFBDE",
"policy": {
"max_n": 0,
"mean_q_min": 24,
"min_length": 42,
"trim_q_min": 11
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [
"alphabet"
],
"gc_count": null,
"length": null,
"n_count": null,
"passed_filter": false,
"quality_sum": null,
"trimmed_quality": null,
"trimmed_sequence": null,
"valid_fastq": false
} | malformed_record | 7bee514545fdb4c397a8a0f62235ad804637cac7368ccc55b04a43fd3af7279e | 3c8596f2bda13a69d6165dbbf167c65e9d8fb4f5ad5cd02e319b03fbdb6e7761 | READS-0000324 | 324 | {
"fastq": "@synthetic_read\nCTACCTAACTTACCACCTATCAGTGCGGTGGTTTCGAGGGTAGTTCGAGGATGTX\n+\nDFJJFEBFFE@H@EHDB?AHGAA?IJDFBGD??C@?FGEHFAI@GAAJED@AIJF",
"policy": {
"max_n": 3,
"mean_q_min": 18,
"min_length": 49,
"trim_q_min": 4
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 10,
"length": 23,
"n_count": 0,
"passed_filter": false,
"quality_sum": 829,
"trimmed_quality": "FCJFECAEII@ABAHGFCBJHEF",
"trimmed_sequence": "TTAGGTGCAAGGGTAAGTATGAG",
"valid_fastq": true
} | clean | 3799dd440c930b64101899253ad6c648b27b861080234c16a3324cadb53aa189 | d4a4137475b38d2f7725fda8d2fb1d694bdad744a08df0b4e9468561ad372a55 | READS-0000325 | 325 | {
"fastq": "@synthetic_read\nTTAGGTGCAAGGGTAAGTATGAGGACGG\n+\nFCJFECAEII@ABAHGFCBJHEF#####",
"policy": {
"max_n": 2,
"mean_q_min": 26,
"min_length": 36,
"trim_q_min": 12
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 37,
"length": 72,
"n_count": 0,
"passed_filter": true,
"quality_sum": 1872,
"trimmed_quality": ";;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;",
"trimmed_sequence": "TAGTAGATAATCGCTATACGATACTCTACAAACGCACGTCGGCAGGCTTTGCTTTCCTCACGGCCCCGACCA",
"valid_... | quality_boundary | 113dd24df1ed0eddee155d26ff52c3debe929df931de2966cb78337e8f9c2480 | c877a0a37ad3959b7c5022f934279622d2c99d25ce17555c06dacbaa4e7ed7ca | READS-0000326 | 326 | {
"fastq": "@synthetic_read\nTAGTAGATAATCGCTATACGATACTCTACAAACGCACGTCGGCAGGCTTTGCTTTCCTCACGGCCCCGACCA\n+\n;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;",
"policy": {
"max_n": 2,
"mean_q_min": 25,
"min_length": 28,
"trim_q_min": 6
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 13,
"length": 33,
"n_count": 0,
"passed_filter": false,
"quality_sum": 1186,
"trimmed_quality": "@FF?IDHGIBDEJ??DEFEHAHG@JHCDIIBAF",
"trimmed_sequence": "TGGATGTGAGAGTAAAAAAGGTAAATACAGGCG",
"valid_fastq": true
} | length_boundary | c8a70f9afe7c407188154a087b130939883a3654428f2c4e9320884d39053682 | 75654fde2f0805ecdc1a94c7f5b5a7b7008cc1432fa0bdf46fab17d4894d0f84 | READS-0000327 | 327 | {
"fastq": "@synthetic_read\nTGGATGTGAGAGTAAAAAAGGTAAATACAGGCG\n+\n@FF?IDHGIBDEJ??DEFEHAHG@JHCDIIBAF",
"policy": {
"max_n": 2,
"mean_q_min": 20,
"min_length": 34,
"trim_q_min": 4
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 22,
"length": 47,
"n_count": 2,
"passed_filter": true,
"quality_sum": 1677,
"trimmed_quality": "BCJBCEJGGC?@FCI?BHHD@ICHEEHJGCIAGAIBFIDAD?DF?IB",
"trimmed_sequence": "TACNACTTGGCTTCTCAGGTTGAGGNTAGCAGTAGGAGAACCCTTCT",
"valid_fastq": true
} | ambiguous_bases | 656f81475d653f09ab32630b5898de67a94dbf6619b531fa7ec04b00e0d00f95 | b91ee72daf2c6d95028eec9976a3512cd0b7dd121b3210e2e771c4679d52c72a | READS-0000328 | 328 | {
"fastq": "@synthetic_read\nTACNACTTGGCTTCTCAGGTTGAGGNTAGCAGTAGGAGAACCCTTCT\n+\nBCJBCEJGGC?@FCI?BHHD@ICHEEHJGCIAGAIBFIDAD?DF?IB",
"policy": {
"max_n": 2,
"mean_q_min": 24,
"min_length": 39,
"trim_q_min": 11
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [
"header"
],
"gc_count": null,
"length": null,
"n_count": null,
"passed_filter": false,
"quality_sum": null,
"trimmed_quality": null,
"trimmed_sequence": null,
"valid_fastq": false
} | malformed_record | 2e4978d125d02f307f15b50426fea87effbf7b752847846ce5f4b8df0a68ddbb | ca6c5fb7ea756586214a31a7e8045c7db311cb35bb9bfd7ff57e0213d253738f | READS-0000329 | 329 | {
"fastq": "synthetic_read\nTGTTTGACTCGTCGTTTGTGACGGCGTGAATGTATAGGCCTGACAGAGCGTTTTACTTAACGGTGAAGTCGCAGAAACCCAGG\n+\nDGIGJ@A@?FGHGACCEDEDCBHID@CCCJHDA?@JDHFEFG@IGIH?@EJCBAEEAHA@??A@?G?BFEJ@HGDH?C@GDBB",
"policy": {
"max_n": 1,
"mean_q_min": 26,
"min_length": 46,
"trim_q_min": 11
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 36,
"length": 75,
"n_count": 0,
"passed_filter": true,
"quality_sum": 2654,
"trimmed_quality": "FC?HCADBBCE?FC?DIH?AGBAD@FDDJFAD?@FCHEGHGIJHDBAJ?EHIH@HIAEEF?HECBDEEEAHAIFE",
"trimmed_sequence": "CACTAGCTTTAATGAAAGGATCGACCTTCACAGGTTTGCGTGAGTTATGGGGTGCTAACAACTAGTCGTCGCGAG",
"... | clean | 5fa7af071325bd6ca67079e67f9a372b1f16c8e57a48e57972aaefe7906de1c7 | 14024a4d7fe7c3321836153b0f5a1acecf9d367f0dbb4a1ee5935189fb2fc091 | READS-0000330 | 330 | {
"fastq": "@synthetic_read\nCACTAGCTTTAATGAAAGGATCGACCTTCACAGGTTTGCGTGAGTTATGGGGTGCTAACAACTAGTCGTCGCGAGTAC\n+\nFC?HCADBBCE?FC?DIH?AGBAD@FDDJFAD?@FCHEGHGIJHDBAJ?EHIH@HIAEEF?HECBDEEEAHAIFE###",
"policy": {
"max_n": 3,
"mean_q_min": 27,
"min_length": 32,
"trim_q_min": 13
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 31,
"length": 63,
"n_count": 0,
"passed_filter": true,
"quality_sum": 1449,
"trimmed_quality": "888888888888888888888888888888888888888888888888888888888888888",
"trimmed_sequence": "CGGGGTGTGAGTCGACCAGTCACACATAGGGAGTAGTGACTTAGACTCTCTTTAGGGTTTACA",
"valid_fastq": true
} | quality_boundary | 1ea717a51e2cbcc7c0eb75461d02f4f7abb8c17a0ab4423cb5f0dd4988214f85 | be3541f518fd9a6d4df71c0178c4eb04b903e5d27972464468dd9c4bed7ca773 | READS-0000331 | 331 | {
"fastq": "@synthetic_read\nCGGGGTGTGAGTCGACCAGTCACACATAGGGAGTAGTGACTTAGACTCTCTTTAGGGTTTACA\n+\n888888888888888888888888888888888888888888888888888888888888888",
"policy": {
"max_n": 3,
"mean_q_min": 22,
"min_length": 29,
"trim_q_min": 13
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 20,
"length": 32,
"n_count": 0,
"passed_filter": false,
"quality_sum": 1134,
"trimmed_quality": "GIIFBHDCI@GBCIC@?ADG??BJFAEDCCII",
"trimmed_sequence": "TTTCGAAGGCTGACGTCGAGCCCCAGGAGAGC",
"valid_fastq": true
} | length_boundary | a90bb6c95bad36cf7bd261f1b3b33f2bde095b3751b3b8edd7bb1a1c78cde63d | c41ba5c2625e06ce15fbe6a756baf2487c85f9b8a20dda29abdd2522d6ec1b19 | READS-0000332 | 332 | {
"fastq": "@synthetic_read\nTTTCGAAGGCTGACGTCGAGCCCCAGGAGAGC\n+\nGIIFBHDCI@GBCIC@?ADG??BJFAEDCCII",
"policy": {
"max_n": 2,
"mean_q_min": 18,
"min_length": 33,
"trim_q_min": 7
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 32,
"length": 79,
"n_count": 4,
"passed_filter": false,
"quality_sum": 2808,
"trimmed_quality": "HHACDFJBFHFJ?FA?@@GIJ@JGFJB@CI@?AJ@JD@FAIFDIA@GFAE@DG@D?JIHABBIGCIB?FIDBDHBGBFE",
"trimmed_sequence": "GAGGTGATTCATATCAACATGCTTTGTAGTGGGAAATCTGNGACNTNTTGTGAAGACCTNAATCCGGTCTAGTTTG... | ambiguous_bases | 0c8bddab7a97c955f46a3ee42271cd4041e47764abfa4173fe49dfd16f156cb4 | 557d69d98227e1bb6c0e6c45f2110cd54765b105fb4a0ed21773353e36c53f51 | READS-0000333 | 333 | {
"fastq": "@synthetic_read\nGAGGTGATTCATATCAACATGCTTTGTAGTGGGAAATCTGNGACNTNTTGTGAAGACCTNAATCCGGTCTAGTTTGGAC\n+\nHHACDFJBFHFJ?FA?@@GIJ@JGFJB@CI@?AJ@JD@FAIFDIA@GFAE@DG@D?JIHABBIGCIB?FIDBDHBGBFE",
"policy": {
"max_n": 3,
"mean_q_min": 19,
"min_length": 22,
"trim_q_min": 9
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [
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],
"gc_count": null,
"length": null,
"n_count": null,
"passed_filter": false,
"quality_sum": null,
"trimmed_quality": null,
"trimmed_sequence": null,
"valid_fastq": false
} | malformed_record | cf71b41c102703320b7bc8656680298d73f0e33c8ea6e8493440021afe8a14df | 5002f89c61d67a530af2f0945bb11f2788aa0ca26f2172640a743230343bafb9 | READS-0000334 | 334 | {
"fastq": "@synthetic_read\nTTTACTCGAAGTGGGCTCACAGGCCGTGCAACAGGATACGACGAGTTCT\n+\nBCCHEI??HJEBJBIBIIGB@JJGBDJFCBJBBD@EFEJCFIBD?DGH ",
"policy": {
"max_n": 2,
"mean_q_min": 20,
"min_length": 26,
"trim_q_min": 14
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 32,
"length": 51,
"n_count": 0,
"passed_filter": true,
"quality_sum": 1814,
"trimmed_quality": "GDJ@@EEFEHI?AGBCEGEEB??CFDHF?DHAI?BGFEGJ?JH@DEHE?JH",
"trimmed_sequence": "TGGTCGGGAAATTGTCTGCGGCGCGGTACACGCCATGGTGACGCGACCTTC",
"valid_fastq": true
} | clean | 4f7bee61636b1f06acc327a9e86201886f82c948286494dc78d2c954d9cd729b | 3514e66a503e0eb24174a92ca2607671da5228e2f5c9378fd986552fb6af6a67 | READS-0000335 | 335 | {
"fastq": "@synthetic_read\nTGGTCGGGAAATTGTCTGCGGCGCGGTACACGCCATGGTGACGCGACCTTCGTCCCAT\n+\nGDJ@@EEFEHI?AGBCEGEEB??CFDHF?DHAI?BGFEGJ?JH@DEHE?JH#######",
"policy": {
"max_n": 2,
"mean_q_min": 27,
"min_length": 44,
"trim_q_min": 5
}
} | {
"brand": "RegalFire",
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"environment": "RegalFire reads computational fixture v1",
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"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
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"quality_sum": 866,
"trimmed_quality": "HFGIF@GHADAHHBIIAAF@EBIE",
"trimmed_sequence": "TCAANTGGTTATTGCNCNCCTTCG",
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} | ambiguous_bases | 93aac61556cb05320ba72395a47806316ebb83ba69ca6d1c078862ae3867cfeb | cb2213a8b7dd3a81eb7662168ae4408b176869bb446434801717755e54253820 | READS-0000338 | 338 | {
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}
} | {
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"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
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} | malformed_record | 1e0dc5eee028c170e26ea05b10a1b4c41bf2b455b051e64d6c856a49f48365a0 | f7ef3705472ea7ce063ae6f624e8ef70f80c195f46ed7a60df68a15782f3abfc | READS-0000339 | 339 | {
"fastq": "@synthetic_read\nAGTAAGACCCACGATAAATGAGTTGATATTTGTACACCGACC\n+\nAB@FDIAEAADC@E?GHEEHHAJFHGGJE?GGJIJGGFJEI ",
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"mean_q_min": 25,
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}
} | {
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"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
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"quality_sum": 1180,
"trimmed_quality": "FB?DCCCB@HAFFGGIIIEADAHG@FFFBIFEG",
"trimmed_sequence": "ACTTAATGCGCACCTCAAGATTTCGGCTCTAGT",
"valid_fastq": true
} | clean | 1bf26d81f4087cba37c1a5367d7261c0c8e2646a553985f50202d67394575f53 | 70472f488061c497c814633f3156a6d266ecabf0ce75915e3aee785a642d6677 | READS-0000340 | 340 | {
"fastq": "@synthetic_read\nACTTAATGCGCACCTCAAGATTTCGGCTCTAGTTTCTT\n+\nFB?DCCCB@HAFFGGIIIEADAHG@FFFBIFEG#####",
"policy": {
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}
} | {
"brand": "RegalFire",
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"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
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"trimmed_quality": "55555555555555555555555555555555555555555555555555555555555555555555",
"trimmed_sequence": "TATTTTGCTAACGCGTTTCCCGCGGAGCGGTGGGTCCCTTGCGCCTCGCCCGGGAAGAGGCATGGCCC",
"valid_fastq": ... | quality_boundary | c8adc8d908fe8375db2f81a1e242126b9459110180e3cfb3acff4e92b92de64d | 2ec06fa7f4f6d7d40e5df33fc536f4cead825be8835b70d0c317a48de0c9b299 | READS-0000341 | 341 | {
"fastq": "@synthetic_read\nTATTTTGCTAACGCGTTTCCCGCGGAGCGGTGGGTCCCTTGCGCCTCGCCCGGGAAGAGGCATGGCCC\n+\n55555555555555555555555555555555555555555555555555555555555555555555",
"policy": {
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}
} | {
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"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
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"trimmed_quality": "@HJBDFABBBAC??DFCAEBB@E@FAAJGF?EGCB@",
"trimmed_sequence": "AAGTCCTGCAGTCTTTGTCTTTCCTCTAAAAGGCGG",
"valid_fastq": true
} | length_boundary | 9a5cd516d57a7e6a9ffb7fc22dfa2847454cccb4ff0524ddbe56b9f88d689431 | 9ea9dffcc52c8241f156bbe782497d2cb5b32a5007fecd278982ae6e307f38a5 | READS-0000342 | 342 | {
"fastq": "@synthetic_read\nAAGTCCTGCAGTCTTTGTCTTTCCTCTAAAAGGCGG\n+\n@HJBDFABBBAC??DFCAEBB@E@FAAJGF?EGCB@",
"policy": {
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"mean_q_min": 20,
"min_length": 35,
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}
} | {
"brand": "RegalFire",
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"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
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"trimmed_quality": "?ICBF?BJ@EIGFHI?FDC@JJD@AEEDBIDEHAA?JFDBGIJ?H",
"trimmed_sequence": "TACCACCGCTCTAGCAACCAGGGACGTCCGGCATCAGCANAATCN",
"valid_fastq": true
} | ambiguous_bases | 98ce6be54b2247951bbe96792c85d28dccc72b4b0ae235fdda481184c3cf8e26 | ff4cf2d675ac91b45c59a9ef7b7a53ea1319d3f45844cd7f210b2d50007e496d | READS-0000343 | 343 | {
"fastq": "@synthetic_read\nTACCACCGCTCTAGCAACCAGGGACGTCCGGCATCAGCANAATCN\n+\n?ICBF?BJ@EIGFHI?FDC@JJD@AEEDBIDEHAA?JFDBGIJ?H",
"policy": {
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"mean_q_min": 26,
"min_length": 50,
"trim_q_min": 15
}
} | {
"brand": "RegalFire",
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"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [
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"quality_sum": null,
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} | malformed_record | 64b3776dd78975d3810aee293646a72fc10e193ddfdf3e2b45eec379ba40beed | baa26cdab65b557622ae8a2dc2bfff0df530040c48712905a404bf112d6aa0ee | READS-0000344 | 344 | {
"fastq": "@synthetic_read\nGCACAACACCGCCACGTAACGCTTGGGA\n-\nIAAIGGAAGIEHFJGIHDGE?FEHDCAG",
"policy": {
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"mean_q_min": 18,
"min_length": 26,
"trim_q_min": 10
}
} | {
"brand": "RegalFire",
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"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 20,
"length": 50,
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"quality_sum": 1050,
"trimmed_quality": "66666666666666666666666666666666666666666666666666",
"trimmed_sequence": "GGTCCAGATTTTCATTAAGACATTATTCAATAGTGATTCGCTACGCGGTC",
"valid_fastq": true
} | quality_boundary | 1012b65896e1b34f406863929a8be9a15e4c49bab24e7b70d61c2611df0234ac | c48eb03a126eaf63d8936415b28bf124ef16c8859a542325b7d118bca120e1ad | READS-0000346 | 346 | {
"fastq": "@synthetic_read\nGGTCCAGATTTTCATTAAGACATTATTCAATAGTGATTCGCTACGCGGTC\n+\n66666666666666666666666666666666666666666666666666",
"policy": {
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"mean_q_min": 21,
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}
} | {
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"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
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"trimmed_quality": "@CIAEC@?A?JDHCHFIJCEA@",
"trimmed_sequence": "GAGCTGGACTAGTAACACTGCA",
"valid_fastq": true
} | length_boundary | 3b15e2c4d65513f0295c0061c4e101abfc2b53809085b23115f78524c39e7893 | 043e6c25c92bbf6fc54d787ddb9d5bfc915e554d7828030990d45d18b4213cfa | READS-0000347 | 347 | {
"fastq": "@synthetic_read\nGAGCTGGACTAGTAACACTGCA\n+\n@CIAEC@?A?JDHCHFIJCEA@",
"policy": {
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"mean_q_min": 24,
"min_length": 21,
"trim_q_min": 14
}
} | {
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"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
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"quality_sum": 1827,
"trimmed_quality": "@AC?HJCBEBF?AJHHIJDIBIJHADCCJ?IAI@ICICGBBAEDHDEEJE?",
"trimmed_sequence": "TACTCATTAGCTCNGATNATGTATTTCGNGCATTAGAGNCCAGGGTCCGTC",
"valid_fastq": true
} | ambiguous_bases | 50433ee132ac889b8e529340f35bfde3c9dbfd0eb79b75322e110395104f718e | c3adf524f966bdd09857e8c3d4a295b0275e75d287efa6e7675eef0ea168d114 | READS-0000348 | 348 | {
"fastq": "@synthetic_read\nTACTCATTAGCTCNGATNATGTATTTCGNGCATTAGAGNCCAGGGTCCGTC\n+\n@AC?HJCBEBF?AJHHIJDIBIJHADCCJ?IAI@ICICGBBAEDHDEEJE?",
"policy": {
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"mean_q_min": 18,
"min_length": 20,
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}
} | {
"brand": "RegalFire",
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"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
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],
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} | malformed_record | f955bd0d1b70464743083e4c7f9a65106d02ddfa7540c9278a6a676ba84f9c22 | d229d45620564ccfe4b1fb6f575fd1eb19879a21db8e7ae852edbd8356560804 | READS-0000349 | 349 | {
"fastq": "@synthetic_read\nGCGCAGGAGTGGCCAGAGCCTACGTAGGGCACGCCGTTGAGACAATCATCCTGTTGCAGATCCTTGTACTTT\n+\n?ECEJ??BAAI?@C??HC?FFHJ?GEGCAFGA@?HDIE?IA?HHCHBDIBFAB@FADFIBJBHAEBIJIHA",
"policy": {
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}
} | {
"brand": "RegalFire",
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"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
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"quality_sum": 1103,
"trimmed_quality": "CFHGBI@@DABGDHHHGHHFHDAE?ED@CEB",
"trimmed_sequence": "TAGGAACGGCCGGTCATCAATTCAGACCAAC",
"valid_fastq": true
} | clean | 144dcb12a7115f2704be8ea7b388dbafc1ac73b564b584a90fd1d7bbda61f9ba | 7923dbe66ea1192d0ced8db6f185e8665dda23663a0dce1fad253e08ebdde8fb | READS-0000350 | 350 | {
"fastq": "@synthetic_read\nTAGGAACGGCCGGTCATCAATTCAGACCAACTAA\n+\nCFHGBI@@DABGDHHHGHHFHDAE?ED@CEB###",
"policy": {
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"mean_q_min": 18,
"min_length": 37,
"trim_q_min": 7
}
} | {
"brand": "RegalFire",
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"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
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"trimmed_quality": "888888888888888888888888888888888888888888888888",
"trimmed_sequence": "GATCAGGCTTGGGTCAAGTCGTTTCTATAAGTCTAATCGGTCTCTGCT",
"valid_fastq": true
} | quality_boundary | 927cca33a770aa770b216d604f921dea75548c889c110568e7dccf016bfc0504 | 07fea9a6c0e1262bedbc6d9fa3c159d353ec0af486b42611c2fe87ecf957d3bf | READS-0000351 | 351 | {
"fastq": "@synthetic_read\nGATCAGGCTTGGGTCAAGTCGTTTCTATAAGTCTAATCGGTCTCTGCT\n+\n888888888888888888888888888888888888888888888888",
"policy": {
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"mean_q_min": 23,
"min_length": 36,
"trim_q_min": 13
}
} | {
"brand": "RegalFire",
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"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
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"trimmed_quality": "FAHJGCCJF@CAGDDI?DJ@@HEFEAF?GBGBGEEA@FDEJ?DA",
"trimmed_sequence": "GTGCCGCAACAATGTGGAATCATTAAGCCTAGTAACCGGACAAA",
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} | length_boundary | 52f6d24ecbe1c713d1b23e89dfed7135c694d3323e0ba6ed17beea400a7ab5e8 | 7f103b993bb0f24483014c68b2d21fe3ce63d844216ff1c39c33122792eed1a0 | READS-0000352 | 352 | {
"fastq": "@synthetic_read\nGTGCCGCAACAATGTGGAATCATTAAGCCTAGTAACCGGACAAA\n+\nFAHJGCCJF@CAGDDI?DJ@@HEFEAF?GBGBGEEA@FDEJ?DA",
"policy": {
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}
} | {
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"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
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"trimmed_quality": "@I@H@BIJCF?E?HAAGEJB@FHE?FJIAEJDEB?IDDFID?CAEEGHE?DH@DAJ?I@C?III?@HHJBCJGJ?A@GGECCB@FCE",
"trimmed_sequence": "NAGTGTACTGTTCCATTTCTAGACTTCCGAATTCATTTTAGTCGTATGCAACATCATACAAGAGAGGTT... | ambiguous_bases | 815d84b72fdeb9e5106881a6f37a83ab151109c05a2b61c3cc664cd4cab65ebe | ec61a8777a1e5b2908cc38009ede776291a9672674666246774fceab35757abd | READS-0000353 | 353 | {
"fastq": "@synthetic_read\nNAGTGTACTGTTCCATTTCTAGACTTCCGAATTCATTTTAGTCGTATGCAACATCATACAAGAGAGGTTTGCGGCAACTCAANCCGT\n+\n@I@H@BIJCF?E?HAAGEJB@FHE?FJIAEJDEB?IDDFID?CAEEGHE?DH@DAJ?I@C?III?@HHJBCJGJ?A@GGECCB@FCE",
"policy": {
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"mean_q_min": 23,
"min_length": 42,
"trim_q_min": 12
}
} | {
"brand": "RegalFire",
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"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
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} | malformed_record | cdd68db02153b6be4acbd82bdf121c2528dca18f5d71502194b6ec681123b596 | 5f818143413afe5f97abb1713fce8599e0a830611c912ce2f179680d780b796d | READS-0000354 | 354 | {
"fastq": "@synthetic_read\nAACCGAGATCAGGTATGAGTCGTGTGGCCTACTCATCGACCATTTACACGTGAGGCTCGCTCAACAAGTAAG\n+\nH@GHHIICHDIICIBBJ@GF?DHHFABIA?JBFJI@IACBADHBBBFDGJG?CGEDIFG@GDFBC?F@AEI",
"policy": {
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"mean_q_min": 23,
"min_length": 22,
"trim_q_min": 5
}
} | {
"brand": "RegalFire",
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"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
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"trimmed_quality": "FEFCJFHFGC?JEBCBA???HG?IEF@C@@D???GHBHDFAJBB@E?JFJA@B?FEDDGDGHG@IBB",
"trimmed_sequence": "CTATGGAGCCACCTTAGGTATCTGGATTTTACCTCAATGCCGGACAAGAGCAAATGGTTGATTATTA",
"valid_fastq": tr... | clean | 49bdc08f2f2c07e8897d4ff4c42e55a0cbc74a0c02643b32bd46fe2b277a4c0b | b7e98a48c9af6c2067f53063f44958b753b212bd0df609e6d11cc5ea539b45c8 | READS-0000355 | 355 | {
"fastq": "@synthetic_read\nCTATGGAGCCACCTTAGGTATCTGGATTTTACCTCAATGCCGGACAAGAGCAAATGGTTGATTATTATAATGCG\n+\nFEFCJFHFGC?JEBCBA???HG?IEF@C@@D???GHBHDFAJBB@E?JFJA@B?FEDDGDGHG@IBB#######",
"policy": {
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"mean_q_min": 21,
"min_length": 43,
"trim_q_min": 11
}
} | {
"brand": "RegalFire",
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"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
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"quality_sum": 2241,
"trimmed_quality": "<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<",
"trimmed_sequence": "CCTACGCGTCCGGATCGAGCGGTCATTCGGATCTGCTCACGCTGTATCTAGCCTCGCGTGGCTTACAAAAGTA... | quality_boundary | d7e6485550c739b5417432c5e6a99bff14114ba99555309dfe5980ecf5d3811e | 73f99eb265530a38aef6475fe0854c961bc723ffb7bbb5fa19112c4e9d79d9d4 | READS-0000356 | 356 | {
"fastq": "@synthetic_read\nCCTACGCGTCCGGATCGAGCGGTCATTCGGATCTGCTCACGCTGTATCTAGCCTCGCGTGGCTTACAAAAGTAGATCGATTTC\n+\n<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<",
"policy": {
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"mean_q_min": 26,
"min_length": 49,
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}
} | {
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"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 12,
"length": 25,
"n_count": 0,
"passed_filter": false,
"quality_sum": 900,
"trimmed_quality": "IICI?@FIBFH?BEIBABII?IFCJ",
"trimmed_sequence": "CCAAGAGCAGGAAAACTGTTTACCG",
"valid_fastq": true
} | length_boundary | b6451c8c1ec675a7f85f5c213d5db0b1c1a210e3ac4b0d45cf7ee0ff41425314 | 30ffc532550fddcf8607e2c29776dd6bc43ef8a0399ca53edc811611134ddd07 | READS-0000357 | 357 | {
"fastq": "@synthetic_read\nCCAAGAGCAGGAAAACTGTTTACCG\n+\nIICI?@FIBFH?BEIBABII?IFCJ",
"policy": {
"max_n": 1,
"mean_q_min": 19,
"min_length": 26,
"trim_q_min": 10
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 42,
"length": 81,
"n_count": 1,
"passed_filter": false,
"quality_sum": 2871,
"trimmed_quality": "AEHGFDGEGBFII@JBFAIJA?@H@JCBJC@EEDFB@IFFCAGJHBGFJE?IBJFD??BH?BA?H@IEB?IAJGAGBDC?C",
"trimmed_sequence": "TAGCATAGATCCNACGCTGGGCTTGGAGACGGATCTTAACCTATAGATATTGGCTCCCTCCCGGAAACCTACGC... | ambiguous_bases | 01ed149b7e679fceb67dea208aca55447ceeb108e3394415b6911c41acc40e55 | fd2079cec76f6619a07c3e116ab45670bbaacf5d7ce910e4e7fff65242809c5f | READS-0000358 | 358 | {
"fastq": "@synthetic_read\nTAGCATAGATCCNACGCTGGGCTTGGAGACGGATCTTAACCTATAGATATTGGCTCCCTCCCGGAAACCTACGCTGCCATG\n+\nAEHGFDGEGBFII@JBFAIJA?@H@JCBJC@EEDFB@IFFCAGJHBGFJE?IBJFD??BH?BA?H@IEB?IAJGAGBDC?C",
"policy": {
"max_n": 0,
"mean_q_min": 19,
"min_length": 43,
"trim_q_min": 4
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [
"header"
],
"gc_count": null,
"length": null,
"n_count": null,
"passed_filter": false,
"quality_sum": null,
"trimmed_quality": null,
"trimmed_sequence": null,
"valid_fastq": false
} | malformed_record | ab9e568b5423818df8e6949175a90138d0e0095488c85250498b8ccdbfe7273f | c2ef8d315aafdb96aa562de4655fe6dad247cfa6c9b2f85de26e6143f184af3c | READS-0000359 | 359 | {
"fastq": "synthetic_read\nTTCCGTGCACGAGATACTCTTACTATCATAAGGTTCGC\n+\nHJCBCDHGGGJHHEJ@E@F?IAGC??@G?BI@DCFA@F",
"policy": {
"max_n": 2,
"mean_q_min": 23,
"min_length": 25,
"trim_q_min": 11
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 19,
"length": 35,
"n_count": 0,
"passed_filter": true,
"quality_sum": 1232,
"trimmed_quality": "IEE@GICJD?GBFF?A?J@???CCHDDGGHCBHJB",
"trimmed_sequence": "GCCCGTTAGTTTTGGTGTGCAGTCTCGTCTCGTGT",
"valid_fastq": true
} | clean | 01c181fe639a5aa31e584d538703e0c94f6d6a2c7ea380987a102b4fec74beef | b6e66eb3eae1965f3ec0a3cc7e91508e9c6fe8199c65b6fa4cd1edcafda8d91b | READS-0000360 | 360 | {
"fastq": "@synthetic_read\nGCCCGTTAGTTTTGGTGTGCAGTCTCGTCTCGTGTCCATCGGT\n+\nIEE@GICJD?GBFF?A?J@???CCHDDGGHCBHJB########",
"policy": {
"max_n": 2,
"mean_q_min": 24,
"min_length": 29,
"trim_q_min": 10
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 38,
"length": 81,
"n_count": 0,
"passed_filter": true,
"quality_sum": 1539,
"trimmed_quality": "444444444444444444444444444444444444444444444444444444444444444444444444444444444",
"trimmed_sequence": "TGTTACCCGATTCTCTTATAGCTAGGGTCAGTCCTGGCAAATCTGGATCACTACGAGGGGTCATCAAGGCACAAT... | quality_boundary | 1d50a21b3b7d9cc587cbdd4498cf5c434caaa30ab440a0a56d87afbdfc0d32aa | 5b36a965dbeb6e99fa524a818cec8ac7764f042d6e539b91e84b7bc1bc483bb7 | READS-0000361 | 361 | {
"fastq": "@synthetic_read\nTGTTACCCGATTCTCTTATAGCTAGGGTCAGTCCTGGCAAATCTGGATCACTACGAGGGGTCATCAAGGCACAATAACAAG\n+\n444444444444444444444444444444444444444444444444444444444444444444444444444444444",
"policy": {
"max_n": 1,
"mean_q_min": 18,
"min_length": 20,
"trim_q_min": 8
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 23,
"length": 38,
"n_count": 0,
"passed_filter": true,
"quality_sum": 1347,
"trimmed_quality": "JBHJIEFFJ@FHEBAAB@AHDH??FF?FJGCACDBGAD",
"trimmed_sequence": "ACTTCCTCCGACCGGAAATGACACCGCCGCACTCTACC",
"valid_fastq": true
} | length_boundary | 28a5778d1336c52a75147270fffe379f2f3cd524f5d432c204cecb6633652fe0 | 8983f577f78bcd9f94bf0de96f4009f4e7d0cf1ad12328aa688cfe40ce32880b | READS-0000362 | 362 | {
"fastq": "@synthetic_read\nACTTCCTCCGACCGGAAATGACACCGCCGCACTCTACC\n+\nJBHJIEFFJ@FHEBAAB@AHDH??FF?FJGCACDBGAD",
"policy": {
"max_n": 0,
"mean_q_min": 20,
"min_length": 38,
"trim_q_min": 5
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 44,
"length": 79,
"n_count": 1,
"passed_filter": false,
"quality_sum": 2828,
"trimmed_quality": "B?EHH?FGI?ADJIC?AAH?DHGF?DCDEH@A?JDGGE@E?CHEJCICHEHJJ@I??ID?IIJAIJA?IFJIDDID@FG",
"trimmed_sequence": "CCCCGTTGAGCAGTCGCNACCCTGGGTAAGGGAGTTTTGTACATCAGTGCCATCGCAACTGCAATCACATCCCAGA... | ambiguous_bases | d42fbd365ba3b8efc34be634bb4720b01e8f9a65218867287a77ccdeacf952bc | 7fafcb8f84364aa95cde8f450b0c148aa8495237ce8177e612826cb3a0386e20 | READS-0000363 | 363 | {
"fastq": "@synthetic_read\nCCCCGTTGAGCAGTCGCNACCCTGGGTAAGGGAGTTTTGTACATCAGTGCCATCGCAACTGCAATCACATCCCAGAGGC\n+\nB?EHH?FGI?ADJIC?AAH?DHGF?DCDEH@A?JDGGE@E?CHEJCICHEHJJ@I??ID?IIJAIJA?IFJIDDID@FG",
"policy": {
"max_n": 0,
"mean_q_min": 28,
"min_length": 35,
"trim_q_min": 15
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 38,
"length": 81,
"n_count": 0,
"passed_filter": true,
"quality_sum": 2867,
"trimmed_quality": "GBIEIGF@DCIAAA?C@@HBJHE?JJFBCBD?HAGGCEAFF?F@?JCC?FABHGD@HAEEG@CEJDIH@E@IAEHFAHEJH",
"trimmed_sequence": "TTTTTCTGCCACTTGTTTCCTTCATTACCACGTAGACTATGCGGCATGATTTGTCAATGGGGGCGTCAACTGCGG... | clean | c0314731cbc4cbe409679e3eb5eb47497f8082dd823e9edb2b9bbed895d48faf | fa375da3110f85ea1e32b914ae89fdca0df9f0469aa854bc679fefee3892d3d5 | READS-0000365 | 365 | {
"fastq": "@synthetic_read\nTTTTTCTGCCACTTGTTTCCTTCATTACCACGTAGACTATGCGGCATGATTTGTCAATGGGGGCGTCAACTGCGGCTGTTTGTCCGG\n+\nGBIEIGF@DCIAAA?C@@HBJHE?JJFBCBD?HAGGCEAFF?F@?JCC?FABHGD@HAEEG@CEJDIH@E@IAEHFAHEJH######",
"policy": {
"max_n": 3,
"mean_q_min": 28,
"min_length": 50,
"trim_q_min": 10
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 33,
"length": 66,
"n_count": 2,
"passed_filter": false,
"quality_sum": 2341,
"trimmed_quality": "E@BBJAHCDDFCC?DIBADHB?DDBGB?JEEJD@JHGHB?DH?FHCG@DDBAJICIDHICI@J@@J",
"trimmed_sequence": "TAATGCGCGCGTGTTNGACCATAGTTCTGACATAGNTTTGTGCCCGTATGGCGATCGCGGCTTTAC",
"valid_fastq": tru... | ambiguous_bases | 54f9cd4b95143eef86151bc72e1ae8a1bedb80e848738eff3b5bf847bf10c6f8 | 31cf4d84841e4ffa6a9bc4571b7232bb13889e1177ebdd8948f737be1fddb820 | READS-0000368 | 368 | {
"fastq": "@synthetic_read\nTAATGCGCGCGTGTTNGACCATAGTTCTGACATAGNTTTGTGCCCGTATGGCGATCGCGGCTTTAC\n+\nE@BBJAHCDDFCC?DIBADHB?DDBGB?JEEJD@JHGHB?DH?FHCG@DDBAJICIDHICI@J@@J",
"policy": {
"max_n": 1,
"mean_q_min": 20,
"min_length": 49,
"trim_q_min": 4
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
{
"errors": [],
"gc_count": 37,
"length": 82,
"n_count": 0,
"passed_filter": true,
"quality_sum": 2878,
"trimmed_quality": "J?FJEEEHCGCGD??FDBFB?BGABJ?J?DAGHHCGEFCJG@?AGDEDAHJI?BA@A?ABGGEH@HJ?B@AIDECCI@??IH",
"trimmed_sequence": "TACCAGCGTCAAAGGAATAACGTATGTATTGTGGGGTTTCGCTGGGTGGAATTAAGTGTACCCGGGCGTAATCC... | clean | b08b788958f2937a9d66ba8326643b00901f5f4dd78f1e5abbf61e8151f0d9d3 | 2c8e0af15cb69b9c231ab96c959602a6f9371c085a2e029bd0faf0867cb666ff | READS-0000370 | 370 | {
"fastq": "@synthetic_read\nTACCAGCGTCAAAGGAATAACGTATGTATTGTGGGGTTTCGCTGGGTGGAATTAAGTGTACCCGGGCGTAATCCTTATATACCTTAT\n+\nJ?FJEEEHCGCGD??FDBFB?BGABJ?J?DAGHHCGEFCJG@?AGDEDAHJI?BA@A?ABGGEH@HJ?B@AIDECCI@??IH#####",
"policy": {
"max_n": 0,
"mean_q_min": 21,
"min_length": 38,
"trim_q_min": 14
}
} | {
"brand": "RegalFire",
"contains_personal_data": false,
"environment": "RegalFire reads computational fixture v1",
"external_records": false,
"label_source": "deterministic_computational_rules",
"license": "MIT",
"llm_ground_truth": false,
"origin": "original_procedural_synthetic"
} | 20,261,001 | train |
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