Repair omega-dependent range-separated PBE workflow in a real PySCF STRSF repository


Repair an inconsistent reduced validation workflow


Repair extxyz stress and virial tensor-label preservation


Repair split-read exon-overlap filtering


Repair edited MRS subspectrum polarity handling


Repair inconsistent genomic interval enrichment counts


Repair unstable spectral registration for drifted MRS transients


Establish first vacuum-plus-wall external-region capability in the TERPSICHORE-native path


Enable projection-wall external-region support in the TERPSICHORE-native path


Complete alternate perturbation-representation support


Complete the Missing Response Capability


Complete 3-D Cross-n FOURIN Spectral Coupling


Establish boundary-regime operator and energy closure in the TERPSICHORE-native path


Complete the native multi-equilibrium TERPSICHORE workflow


Restore thermal-equilibrium invariants in a Liouville-space relaxation workflow


Repair HMMRATAC peak refinement under sparse signal resolution


Repair dark-matter line-of-sight maps in Gammapy


Restore blacklist semantics in an HMMRATAC chromatin-accessibility workflow


Complete robust topic-to-cistrome binarization for independent probability matrices


The task source is an LGPL-3.0-or-later DeePMD-kit excerpt.

The task source is an LGPL-3.0-or-later DeePMD-kit excerpt; explicit restricted-license opt-in is required.

Complete an edge-graph geometry and force/virial capability for atomistic models


atomistic thermodynamic integration and free-energy calculation

Complete a missing atomic-liquid thermodynamic-integration capability


Repair an inconsistent volume-to-surface projection


Restore continuous NPT periodic-boundary unwrapping


Restore coherent inference in a centered factorial-effects model


Repair inconsistent cross-protocol Osprey validation reports


Restore isentropic interpolation for terrain-following model data


Restore consistent NMR peak-set encoding under batch padding


Repair control-referenced relative responses in a single-cell perturbation workflow


Restore annotation equivalence after circular-record orientation normalization


Repair format-conformant SHELX/AIRSS .res export in a crystallographic IO workflow


Restore documented average-reference semantics for mixed-modality recordings


MIT; MIT AND LGPL-family AND BSD-3-Clause

The OpenMM source snapshot includes LGPL-covered CUDA and OpenCL platform components and therefore requires explicit restricted-license opt-in.

Repair an inconsistent peptide energy after topology import


Repair inconsistent energies across equivalent periodic representations


manifests/materials.jsonl and retained upstream notices

Repair an inconsistent stochastic trajectory calculation


The NASA ODEPACK report is retained for reproducibility, but its public-domain or commercial redistribution status is not represented by an explicit standard license grant; commercial users must opt in after their own review.

Repair an incomplete stiff-kinetics campaign


Repair inconsistent sampling on a spherical curvilinear ocean grid


Repair an inconsistent multiframe MR reconstruction


Repair inconsistent crystal classification across equivalent representations


Repair a river-network sediment transport calculation


Restore consistent magnetic-dipole electromagnetic predictions


Repair an inconsistent near-Earth vector conversion


Repair an inconsistent solar-coordinate archive workflow


Repair an inconsistent porous-volume characterization


Repair inconsistent lithium-ion discharge predictions


Repair inconsistent finite-volume operations on a connected multi-face grid


Repair an inconsistent X-ray spectral-timing analysis


Repair an inconsistent broadband microwave composite


Repair an inconsistent alloy equilibrium assessment


Restore consistent stochastic-field behavior on nonuniform grids


Repair an inconsistent tensor-network state calculation


Repair an inconsistent planetary gradient-tensor calculation


Restore a nonuniform finite-volume phase-field workflow


Repair a representation-dependent physical surface Dice workflow


Repair an inconsistent tandem-mass spectral similarity workflow


Restore a scientific template-comparison workflow


Repair a physically inconsistent orbital history export


LGPL-2.1-covered MDTraj source and the complete upstream manual require explicit restricted-license opt-in.

Investigate a periodic trajectory-processing anomaly


Repair a valid OpenMC fixed-source workflow


Restore physical consistency in calibrated cell morphometry


Restore a complete cross-band drift-correction recording


Repair inconsistent celestial image representation in a mosaic


Repair an inconsistent archived elasticity workflow


Repair inconsistent population-history estimates after archive curation


Repair inconsistent molecular-energy interpretation in a quantum-chemistry log parser


astrophysical hydrodynamics and particle-based field visualization

Repair inconsistent particle-field visualization results


The Iris source snapshot is LGPL-3.0-or-later; explicit restricted-license opt-in is required for this task.

Restore regional climate-model validation consistency


Repair a seasonal fire-weather state transition


Restore biologically consistent retrieval from a VCF archive


Restore a complete Hi-C contact-decay analysis


Restore chemically consistent proteoform ion annotations


MIT/X11 (BSD-like; see upstream copyright manifest)

Repair an orientation-sensitive fiber-scattering reduction


Repair an incomplete DICOM color image presentation workflow


Repair inconsistent alternate-conformer structure connectivity


The DeePTB source snapshot is LGPL-3.0-family; explicit restricted-license opt-in is required. The cited article is CC BY-NC-ND and is not bundled.

Repair an ill-conditioned overlap band-postprocessing workflow


The DeePMD-kit source snapshot is LGPL-3.0-family; explicit restricted-license opt-in is required for this task.

Restore consistent compressed Deep Potential tabulation


Repair a batched parametric tracking workflow


Repair an inconsistent oriented-envelope fallback workflow


Repair an inconsistent astronomical aperture workflow


Repair molecular-string translation for catalogue workflows


Repair inconsistent geospatial raster remapping


Repair local study workflow


Repair a workflow consistency bug


Repair bond-order species reporting


Repair ABACUS relaxation archive/reload semantics


Inconsistent archived observables


Repair a silent MatGL fine-tuning incompatibility


Repair a silent diffusion-MRI denoising inconsistency


Repair a boundary aggregation failure


Repair inconsistent ORCA excited-state oscillator strengths


Restore multidimensional NMR acquisition grids


Repair a workflow regression


Repair inconsistent Chemprop reaction observations


Repair a patient-space round trip in MONAI


Repair magnetic-space-group operations across archived settings


Repair a repeated porous-electrode transport workflow


The retained CLIMADA-derived source is GPL-3.0; explicit restricted-license opt-in is required.

Repair a wrapped tropical-cyclone hazard workflow


The retained DeePMD-derived source is LGPL-3.0-or-later; explicit restricted-license opt-in is required.

Repair spin-model consistency in DeePMD-kit


The retained Satpy-derived source is GPL-3.0-or-later; explicit restricted-license opt-in is required.

Repair inconsistent satellite parallax geolocation


Repair an inconsistent GNSS point solution


LGPL-2.1-family and MIT (upstream conflict); MIT

The upstream AuToGraFS snapshot has unresolved LGPL-2.1 versus MIT declarations; only the retained code and independently generated synthetic data are distributed under explicit restricted opt-in.

Repair calibrated framework embedding relaxation


The required Chen2020 parameter CSVs are derived from a CC-BY-NC-ND article; explicit restricted-material opt-in is required.

Repair an inconsistent battery-model reproduction


The retained 2016H66 force-field records have no complete per-file redistribution grant; explicit restricted-material opt-in is required.

Repair an inconsistent polymer coordinate workflow


Repair symmetric composite laminate ABD calculations


Repair inconsistent finite-volume advection edge states


BSD-3-Clause; BSL-1.0; No article redistribution grant asserted

Restore a stereo-preserving tautomer workflow


Reproduce and extend a version-pinned MAP4/MAPC retrieval protocol


Repair a public symbolic workflow


Restore stable Jacobi theta evaluations across difficult regimes


Repair paired wrinkle FE analysis


Restore consistent cross-section analysis results


Restore consistent tapered-filament free response


Repair an inconsistent hybrid-section plastic capacity workflow


Repair an inconsistent solar-resource workflow


Repair an implausible storage history at a planning-epoch boundary


Restore physically meaningful structural stability checks


Repair mode-dependent structural analysis observations


Repair inconsistent lateral-frame member observations


Repair inconsistent periodic molecular energy representations


Repair a molecular curvature workflow for reaction-path analysis