Datasets:
Tasks:
Text Classification
Formats:
csv
Languages:
English
Size:
< 1K
Tags:
clinical-trials
clarus-benchmark
state-space
sepsis
intervention-competition
instability-geometry
License:
Create scorer.py
Browse files
scorer.py
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import argparse
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import csv
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import json
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import sys
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SCORER_VERSION = "1.0"
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LABEL_COL = "label_best_intervention"
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ID_COL = "scenario_id"
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def read_csv(path):
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with open(path, "r", encoding="utf-8") as f:
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return list(csv.DictReader(f))
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def align(truth, preds):
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truth_map = {r[ID_COL]: r for r in truth}
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pred_map = {r[ID_COL]: r for r in preds}
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if set(truth_map) != set(pred_map):
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raise ValueError("scenario_id mismatch")
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y_true = []
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y_pred = []
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for sid in sorted(truth_map):
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true = truth_map[sid][LABEL_COL]
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pred = pred_map[sid]["prediction"]
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if pred not in ["A", "B", "C"]:
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raise ValueError(f"Invalid prediction for {sid}")
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y_true.append(true)
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y_pred.append(pred)
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return y_true, y_pred
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def accuracy(y_true, y_pred):
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correct = sum(t == p for t, p in zip(y_true, y_pred))
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return correct / len(y_true)
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def main():
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parser = argparse.ArgumentParser()
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parser.add_argument("--predictions", required=True)
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parser.add_argument("--truth", required=True)
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args = parser.parse_args()
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try:
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preds = read_csv(args.predictions)
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truth = read_csv(args.truth)
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y_true, y_pred = align(truth, preds)
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result = {
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"scorer_version": SCORER_VERSION,
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"accuracy": accuracy(y_true, y_pred),
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"primary_metric": "accuracy"
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}
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print(json.dumps(result, indent=2))
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except Exception as e:
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print(e, file=sys.stderr)
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sys.exit(1)
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if __name__ == "__main__":
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main()
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