Publish source-bound public metadata catalog

README.md

@@ -0,0 +1,24 @@
+---
+pretty_name: SpatialDataAgent-DB Public Catalog
+license: other
+license_name: source-specific-data-terms
+license_link: https://huggingface.co/datasets/Biogod/SpatialDataAgent-DB#data-use-and-source-terms
+tags:
+- biology
+- spatial-transcriptomics
+- metadata
+configs:
+- config_name: samples
+  data_files: catalog/samples.parquet
+---
+# SpatialDataAgent-DB Public Catalog
+
+Search and inspect the metadata for 12,163 samples, 1,265 published study folders and 635,240,170 spatial observations in the fixed `sda-unified-20261010-v3` snapshot. It includes 8,211 samples with released tissue images.
+
+This repository contains metadata only. [Full sample data](https://huggingface.co/datasets/Biogod/SpatialDataAgent-DB) require manual access approval and are currently being uploaded. The metadata catalog's presence does not imply that the full upload is complete.
+
+`catalog/samples.parquet` and `samples.csv` provide the original release index, including repository-relative `sample_dir` paths and source content hashes. Study metadata and source-bound biological/audit annotations are included as `atlas-study-metadata.jsonl` and `atlas-sample-metadata.jsonl`.
+
+Reported vocabulary and age units are not harmonized. Missing biological metadata and review states remain explicit. Counts capability, source verification, image registration and human review describe different checks. Observations are spots, cells, bins or beads, not independent donors.
+
+Source index SHA256: `909c4ec50e71c636eadc7bf01a9479fef1b4fd480ac348dfea6b785e566c7bed`. See the main Dataset Card for data organization, quality distinctions, splits, provenance and source-specific reuse terms.

catalog/samples.parquet

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:a5deedecd5e0fbe0d2598947e4bead93e7f5c757037bf3cb25fc71b4fdf02cf7
+size 1900742

catalog/schema.json

@@ -0,0 +1,447 @@
+{
+ "index_columns": {
+  "gsm": "GEO sample (canonical GSM of its content group)",
+  "gse": "all GEO series listing the GSM, joined with '+'; the split is computed on this string",
+  "published_gse": "series folder of the sample: samples/<published_gse>/<gsm>",
+  "source_pipeline": "sda-all (agent standardization, independent scorer) or hesrt (H&E Visium/ST, human review)",
+  "source_release": "SDA-All scorer version of the batch, sda-all-gap-20261009, or hesrt-v1.3",
+  "platform": "harmonized platform",
+  "technology": "technology as written by the authors",
+  "organism": "as written in GEO",
+  "tissue": "as written in GEO",
+  "observation_unit": "spot / bin / cell / bead",
+  "n_obs": "observations",
+  "n_vars": "features",
+  "expression_state": "counts (integer X) / non-integer / unknown (SDA-All: as declared and scored)",
+  "verification": "VERIFIED / ATTESTED (SDA-All scorer) or human_visual_review (HESRT)",
+  "expression_sha256": "SHA256 of the sample's spatial.h5ad",
+  "coordinate_units": "units of obsm['spatial']: um / pixel / native_grid / unstated",
+  "um_basis": "verified / declared_unverified / platform_constant / unresolved",
+  "um_per_unit": "micrometres per coordinate unit when known",
+  "has_spatial_um": "obsm['spatial_um'] present (micrometre copy of non-um coordinates)",
+  "has_image": "image.tif present",
+  "image_stain": "stain of image.tif ('(heuristic)' = pixel-only call)",
+  "image_stain_basis": "basis of the stain label",
+  "image_um_per_px": "micrometres per image.tif pixel when known",
+  "image_registration": "VERIFIED / PARTIAL / UNRESOLVED / FAILED / ABSENT (modality acceptance), WITHHELD (HESRT review FAIL: no image delivered), HESRT_HUMAN_REVIEW, empty = no registrable image",
+  "image_sha256": "SHA256 of image.tif",
+  "segmentation": "cell / nucleus boundary acceptance (sources in sample.json)",
+  "molecules": "molecule table acceptance (sources in sample.json)",
+  "molecules_use": "positions_only: molecules without usable cell IDs",
+  "flags": "units_unstated / attested / summary_features_in_matrix / hesrt_review_fail / hesrt_fail_image_released / image_partial_coverage / image_review_fail",
+  "qc_flags": "deposit QC flags (annotation only)",
+  "drop_features": "features to drop before use",
+  "review_decision": "latest author review of this expression file: PASS / FAIL / UNSURE",
+  "review_category": "review category",
+  "review_notes": "review notes",
+  "content_group": "independence unit",
+  "group_kind": "cross_gse_redeposit / library_alias",
+  "aliases": "GSMs with identical content not listed as rows",
+  "split": "train / val / test by series",
+  "sample_dir": "samples/<published_gse>/<gsm>"
+ },
+ "sample_json": {
+  "$schema": "https://json-schema.org/draft/2020-12/schema",
+  "title": "sda-release-sample-1",
+  "type": "object",
+  "additionalProperties": false,
+  "required": [
+   "schema",
+   "release_id",
+   "gsm",
+   "gse",
+   "published_gse",
+   "metadata",
+   "expression",
+   "coordinates",
+   "image",
+   "segmentation",
+   "molecules",
+   "quality",
+   "dedup",
+   "split",
+   "provenance"
+  ],
+  "properties": {
+   "schema": {
+    "const": "sda-release-sample-1"
+   },
+   "release_id": {
+    "type": "string"
+   },
+   "gsm": {
+    "type": "string",
+    "pattern": "^GSM[0-9]+$"
+   },
+   "gse": {
+    "type": "array",
+    "items": {
+     "type": "string",
+     "pattern": "^GSE[0-9]+$"
+    },
+    "minItems": 1
+   },
+   "published_gse": {
+    "type": "string",
+    "pattern": "^GSE[0-9]+$"
+   },
+   "metadata": {
+    "type": "object",
+    "required": [
+     "organism",
+     "tissue",
+     "platform",
+     "technology"
+    ],
+    "properties": {
+     "organism": {
+      "type": [
+       "string",
+       "null"
+      ]
+     },
+     "tissue": {
+      "type": [
+       "string",
+       "null"
+      ]
+     },
+     "platform": {
+      "type": "string"
+     },
+     "technology": {
+      "type": [
+       "string",
+       "null"
+      ]
+     },
+     "fields": {
+      "type": "object"
+     },
+     "field_sources": {
+      "type": "object"
+     }
+    }
+   },
+   "expression": {
+    "type": "object",
+    "additionalProperties": false,
+    "required": [
+     "file",
+     "sha256",
+     "n_obs",
+     "n_vars",
+     "state",
+     "observation_unit",
+     "verification"
+    ],
+    "properties": {
+     "file": {
+      "const": "spatial.h5ad"
+     },
+     "sha256": {
+      "type": "string",
+      "pattern": "^[0-9a-f]{64}$"
+     },
+     "n_obs": {
+      "type": "integer",
+      "minimum": 1
+     },
+     "n_vars": {
+      "type": "integer",
+      "minimum": 1
+     },
+     "state": {
+      "type": "string"
+     },
+     "observation_unit": {
+      "type": [
+       "string",
+       "null"
+      ]
+     },
+     "verification": {
+      "type": "string"
+     }
+    }
+   },
+   "coordinates": {
+    "type": "object",
+    "additionalProperties": false,
+    "required": [
+     "obsm_key",
+     "units",
+     "um_basis",
+     "spatial_um"
+    ],
+    "properties": {
+     "obsm_key": {
+      "const": "spatial"
+     },
+     "units": {
+      "enum": [
+       "mm",
+       "native_grid",
+       "nm",
+       "pixel",
+       "um",
+       "unstated"
+      ]
+     },
+     "um_basis": {
+      "enum": [
+       "declared_unverified",
+       "platform_constant",
+       "unresolved",
+       "verified"
+      ]
+     },
+     "um_per_unit": {
+      "type": [
+       "number",
+       "null"
+      ]
+     },
+     "um_basis_detail": {
+      "type": [
+       "string",
+       "null"
+      ]
+     },
+     "spatial_um": {
+      "type": "boolean"
+     }
+    }
+   },
+   "image": {
+    "oneOf": [
+     {
+      "type": "null"
+     },
+     {
+      "type": "object",
+      "additionalProperties": false,
+      "required": [
+       "file",
+       "sha256",
+       "shape",
+       "dtype",
+       "channels",
+       "stain",
+       "um_per_px",
+       "spatial_to_pixel",
+       "registration",
+       "inside_fraction",
+       "source"
+      ],
+      "properties": {
+       "file": {
+        "const": "image.tif"
+       },
+       "sha256": {
+        "type": "string",
+        "pattern": "^[0-9a-f]{64}$"
+       },
+       "shape": {
+        "type": "array",
+        "items": {
+         "type": "integer"
+        },
+        "minItems": 2,
+        "maxItems": 2
+       },
+       "dtype": {
+        "enum": [
+         "uint8",
+         "uint16"
+        ]
+       },
+       "channels": {
+        "type": "array",
+        "items": {
+         "type": "string"
+        },
+        "minItems": 1
+       },
+       "stain": {
+        "type": [
+         "string",
+         "null"
+        ]
+       },
+       "stain_basis": {
+        "type": [
+         "string",
+         "null"
+        ]
+       },
+       "um_per_px": {
+        "type": [
+         "number",
+         "null"
+        ]
+       },
+       "spatial_to_pixel": {
+        "type": "array",
+        "minItems": 3,
+        "maxItems": 3,
+        "items": {
+         "type": "array",
+         "items": {
+          "type": "number"
+         },
+         "minItems": 3,
+         "maxItems": 3
+        }
+       },
+       "registration": {
+        "type": "string"
+       },
+       "review": {
+        "type": [
+         "string",
+         "null"
+        ]
+       },
+       "inside_fraction": {
+        "type": "number",
+        "minimum": 0,
+        "maximum": 1
+       },
+       "source": {
+        "type": "array"
+       }
+      }
+     }
+    ]
+   },
+   "segmentation": {
+    "type": [
+     "object",
+     "null"
+    ]
+   },
+   "molecules": {
+    "type": [
+     "object",
+     "null"
+    ]
+   },
+   "quality": {
+    "type": "object",
+    "required": [
+     "flags",
+     "qc_flags",
+     "drop_features",
+     "review"
+    ],
+    "properties": {
+     "flags": {
+      "type": "array",
+      "items": {
+       "type": "string"
+      }
+     },
+     "qc_flags": {
+      "type": "array",
+      "items": {
+       "type": "string"
+      }
+     },
+     "drop_features": {
+      "type": "array",
+      "items": {
+       "type": "string"
+      }
+     },
+     "review": {
+      "type": [
+       "object",
+       "null"
+      ]
+     }
+    }
+   },
+   "dedup": {
+    "type": "object",
+    "required": [
+     "content_group",
+     "group_kind",
+     "aliases"
+    ],
+    "properties": {
+     "content_group": {
+      "type": "string"
+     },
+     "group_kind": {
+      "type": [
+       "string",
+       "null"
+      ]
+     },
+     "aliases": {
+      "type": "array",
+      "items": {
+       "type": "string"
+      }
+     }
+    }
+   },
+   "split": {
+    "enum": [
+     "train",
+     "val",
+     "test"
+    ]
+   },
+   "provenance": {
+    "type": "object",
+    "required": [
+     "pipeline",
+     "source_release",
+     "files"
+    ],
+    "properties": {
+     "pipeline": {
+      "enum": [
+       "sda-all",
+       "hesrt"
+      ]
+     },
+     "source_release": {
+      "type": "string"
+     },
+     "files": {
+      "type": "array",
+      "items": {
+       "type": "object",
+       "required": [
+        "role",
+        "path"
+       ],
+       "properties": {
+        "role": {
+         "type": "string"
+        },
+        "path": {
+         "type": "string"
+        },
+        "sha256": {
+         "type": [
+          "string",
+          "null"
+         ]
+        }
+       }
+      }
+     }
+    }
+   }
+  }
+ },
+ "sample_folder": [
+  "image.tif",
+  "sample.json",
+  "spatial.h5ad"
+ ]
+}

catalog/studies.csv

@@ -0,0 +1,1276 @@
+published_gse,samples,observations,with_image,platforms,organisms,pipelines,split
+GSE111672,8,3766,0,ST (legacy),Homo sapiens,sda-all,val
+GSE120374,317,81896,0,ST (legacy),Mus musculus,sda-all,train
+GSE130682,1,113429,1,Other,Mus musculus,hesrt,train
+GSE135805,4,3752,0,ST (legacy),Homo sapiens,sda-all,train
+GSE137986,11,18643,0,Other,Mus musculus,sda-all,train
+GSE144239,16,17599,16,ST (legacy);Visium,Homo sapiens,hesrt,train
+GSE147747,75,34103,75,ST (legacy),Mus musculus,hesrt,train
+GSE148612,6,15658,6,Visium,Mus musculus,hesrt,test
+GSE153424,8,30667,4,Visium,Mus musculus,sda-all,train
+GSE153859,3,5978,3,Visium,Mus musculus,hesrt,train
+GSE154107,1,1888,1,Visium,Mus musculus,hesrt,train
+GSE155121,8,14284,0,Visium,Homo sapiens,sda-all,train
+GSE156862,5,9115,0,DBiT-seq,Mus musculus,sda-all,train
+GSE158328,8,9330,8,Visium,Homo sapiens,hesrt,train
+GSE158450,1,3024,1,Visium,Mus musculus,hesrt,train
+GSE158730,4,6198,4,Visium,Mus musculus,hesrt,train
+GSE159709,3,7281,0,Visium,Danio rerio,sda-all,train
+GSE160137,4,790,4,Visium,Mus musculus,sda-all,train
+GSE161318,3,2988,3,Visium,Mus musculus,hesrt,train
+GSE161369,8,442693,7,Xenium,Homo sapiens,sda-all,test
+GSE163631,5,3364,0,Visium,Mus musculus,sda-all,train
+GSE165141,12,8816,0,ST (legacy),Mus musculus,sda-all,train
+GSE166948,6,3909,6,Visium,Mus musculus,hesrt,val
+GSE169012,40,1828152,0,Slide-seq,Mus musculus,sda-all,train
+GSE169749,2,6234,2,Visium,Mus musculus,hesrt,train
+GSE171351,4,4086,4,Visium,Homo sapiens,hesrt,val
+GSE171406,3,6906,3,Visium,Homo sapiens;Mus musculus,hesrt,train
+GSE172416,2,4274,2,Visium,Homo sapiens,hesrt,val
+GSE173651,6,15024,6,Visium,Homo sapiens,hesrt,train
+GSE174265,7,17580,0,Visium,Mus musculus,sda-all,train
+GSE174313,4,1670,4,Visium,Mus musculus,hesrt,train
+GSE174321,4,12247,4,Visium,Mus musculus,hesrt,train
+GSE174647,181,83278,176,ST (legacy),Homo sapiens,hesrt;sda-all,test
+GSE175540,24,74220,24,Visium,Homo sapiens,hesrt,train
+GSE176092,14,22107,0,Visium,Mus musculus,sda-all,test
+GSE178221,3,5256,3,Visium,Homo sapiens; Mus musculus,hesrt,train
+GSE178361,2,2220,2,Visium,Homo sapiens,hesrt,train
+GSE178636,4,5964,4,Visium,Mus musculus,hesrt,train
+GSE178758,4,4428,4,Visium,Mus musculus,hesrt,train
+GSE179572,6,12566,6,Visium,Homo sapiens,hesrt,train
+GSE180682,8,10068,8,Visium,Mus musculus,hesrt,train
+GSE181300,8,12038,8,Visium,Homo sapiens,hesrt,val
+GSE182127,7,19066,7,Visium,Mus musculus,hesrt,train
+GSE182208,1,2603,1,Visium,Homo sapiens,hesrt,val
+GSE182867,4,6415,4,Visium,Homo sapiens,sda-all,val
+GSE182939,5,9539,5,Visium,Mus musculus,hesrt,train
+GSE183279,44,1514962,0,Slide-seq,Homo sapiens,sda-all,train
+GSE183456,22,22937,22,Visium,Homo sapiens,hesrt,train
+GSE184369,15,9044,15,Visium,Mus musculus,hesrt,train
+GSE184371,1,711,0,Visium,Mus musculus,sda-all,train
+GSE184384,2,4668,2,Visium,Mus musculus,hesrt,train
+GSE184510,8,21753,7,Visium,Homo sapiens,hesrt;sda-all,train
+GSE185386,15,430191,0,Slide-seq,Homo sapiens,sda-all,train
+GSE185477,1,2265,1,Visium,Homo sapiens,sda-all,train
+GSE185715,14,21548,14,Visium,Homo sapiens;Mus musculus,hesrt,train
+GSE186097,2,50145,0,Other,Mus musculus,sda-all,train
+GSE186290,1,2429,1,Visium,Mus musculus,hesrt,train
+GSE186818,1,3095,1,Visium,Takifugu alboplumbeus,hesrt,train
+GSE188257,4,4263,4,Visium,Mus musculus,hesrt,train
+GSE188888,4,6150,4,Visium,Mus musculus,hesrt,val
+GSE189042,1,4346,1,Visium,Homo sapiens,hesrt,train
+GSE189184,16,26373,16,Visium,Homo sapiens,hesrt,train
+GSE189487,6,17022,0,Visium,Homo sapiens,sda-all,train
+GSE190094,84,2344995,0,Slide-seq,Mus musculus,sda-all,train
+GSE190595,2,7481,2,Visium,Mus musculus,hesrt,train
+GSE190811,4,16921,4,Visium,Homo sapiens,hesrt,train
+GSE190910,8,13513,8,Visium,Mus musculus,sda-all,train
+GSE192402,2,48811,0,Slide-seq,Homo sapiens,sda-all,train
+GSE192460,21,14121,0,Visium,Homo sapiens,sda-all,val
+GSE192742,15,24179,15,Visium,Homo sapiens;Mus musculus,hesrt,train
+GSE193107,8,27089,8,Visium,Mus musculus,hesrt,train
+GSE193460,4,7627,3,Visium,Mus musculus,sda-all,train
+GSE194329,11,27233,11,Visium,Homo sapiens,hesrt,train
+GSE194338,1,3651,1,Visium,Mus musculus,hesrt,train
+GSE195575,6,17281,6,Visium,Mus musculus,hesrt,test
+GSE195598,4,6119,4,Visium,Mus musculus,hesrt,train
+GSE195661,14,33214,14,Visium,Homo sapiens,hesrt,val
+GSE196208,1,1521,1,Visium,Homo sapiens,sda-all,train
+GSE196506,1,1229,0,Visium,Mus musculus,sda-all,train
+GSE197023,19,13742,19,Visium,Homo sapiens,hesrt,train
+GSE197150,71,1515100,0,MERFISH/MERSCOPE,Homo sapiens,sda-all,train
+GSE197317,6,9635,6,Visium,Homo sapiens,hesrt,test
+GSE198012,4,8917,0,Visium,Mus musculus,sda-all,val
+GSE198128,3,8253,3,Visium,Phalaenopsis aphrodite,sda-all,train
+GSE198353,3,7399,3,Visium,Mus musculus,sda-all,train
+GSE198745,1,4186,1,Visium,Homo sapiens,hesrt,train
+GSE199348,4,113310,0,Slide-seq,Schmidtea mediterranea,sda-all,train
+GSE199659,4,7028,4,Visium,Mus musculus,hesrt,val
+GSE200310,2,2420,2,Visium,Homo sapiens,hesrt,train
+GSE200720,8,19760,8,Visium,Mus musculus,hesrt,val
+GSE200751,2,3069,2,Visium,Mus musculus,hesrt,train
+GSE201610,6,16428,6,Visium,Mus musculus,hesrt,train
+GSE202011,30,24227,29,Visium,Homo sapiens,hesrt;sda-all,train
+GSE202322,6,15026,6,Visium,Mus musculus,hesrt,test
+GSE202623,3,347968,0,MERFISH/MERSCOPE,Mus musculus,sda-all,test
+GSE203424,12,34033,12,Visium,Mus musculus,hesrt,train
+GSE203552,4,4602,4,Visium,Homo sapiens,hesrt,test
+GSE203612,12,25529,12,Visium,Homo sapiens,hesrt,train
+GSE205054,4,15833,0,Other,Mus musculus,sda-all,train
+GSE205055,7,45382,0,Other,Homo sapiens;Mus musculus,sda-all,train
+GSE205307,2,4172,2,Visium,Mus musculus,hesrt,test
+GSE205707,14,12999,6,Visium,Canis lupus familiaris;Mus musculus,hesrt;sda-all,val
+GSE206245,17,40768,14,ST (legacy);Visium,Homo sapiens,hesrt;sda-all,train
+GSE206306,7,9789,7,Visium,Homo sapiens,hesrt,train
+GSE206552,4,10059,4,Visium,Homo sapiens,hesrt,train
+GSE206621,8,3293,8,Visium,Homo sapiens,hesrt,train
+GSE206787,4,3852,4,Visium,Mus musculus,hesrt,train
+GSE206790,1,1797,1,Visium,Homo sapiens,sda-all,train
+GSE207205,8,18329,8,Visium,Homo sapiens,hesrt,train
+GSE207546,3,10774,3,Visium,Mus musculus,sda-all,train
+GSE207843,18,23072,0,Other,Mus musculus,sda-all,train
+GSE208253,12,26371,12,Visium,Homo sapiens,hesrt,train
+GSE208747,26,103185,26,Visium,Homo sapiens,sda-all,test
+GSE209583,14,30749,14,Visium,Mus musculus,hesrt,train
+GSE210041,2,7079,2,Visium,Homo sapiens,hesrt,train
+GSE210380,4,5276,4,Visium,Mus musculus,hesrt,train
+GSE210616,43,56567,43,Visium,Homo sapiens,hesrt,train
+GSE210637,6,13003,6,Visium,Mus musculus,hesrt,val
+GSE210738,2,1176,0,Visium,"Mus musculus
+mouse gut metagenome",sda-all,test
+GSE210773,4,6970,4,Visium,Oryctolagus cuniculus,hesrt,train
+GSE211785,4,12861,4,Visium,Homo sapiens,hesrt,train
+GSE211895,29,53192,29,Visium,Homo sapiens;Mus musculus;Rattus norvegicus,hesrt,val
+GSE211956,8,20123,8,Visium,Homo sapiens,sda-all,train
+GSE212323,6,14524,6,Visium,Mus musculus,hesrt,train
+GSE212526,4,7376,4,Visium,Homo sapiens,hesrt,train
+GSE212706,6,7674,6,Visium,Mus musculus,hesrt,train
+GSE212903,6,16743,6,Visium,Mus musculus,hesrt,train
+GSE213216,2,3348,2,Visium,Homo sapiens,sda-all,train
+GSE213264,18,35096,0,Other,Homo sapiens;Mus musculus,sda-all,train
+GSE213286,1,26210,0,Slide-seq,Danio rerio,sda-all,train
+GSE213306,8,14172,0,Visium,Homo sapiens,sda-all,train
+GSE213388,4,6654,4,Visium,Mus musculus,hesrt,val
+GSE213666,1,332,1,Visium,Mus musculus,hesrt,train
+GSE213688,15,26726,15,Visium,Homo sapiens,hesrt,train
+GSE213699,8,22921,8,Visium,Homo sapiens,hesrt,train
+GSE214138,13,32500,0,DBiT-seq,Homo sapiens,sda-all,train
+GSE214349,19,59001,19,Visium,Mus musculus,hesrt,train
+GSE214363,2,3974,2,Visium,Mus musculus,hesrt,train
+GSE214571,4,9323,4,Visium,Homo sapiens,hesrt,train
+GSE214611,14,35196,14,Visium,Homo sapiens;Mus musculus,hesrt,train
+GSE214989,1,2397,1,Visium,Mus musculus,hesrt,train
+GSE215305,1,1586,1,Visium,Mus musculus,hesrt,train
+GSE215361,8,26634,8,Visium,Mus musculus,hesrt,train
+GSE215897,34,68878,34,Visium,Homo sapiens,sda-all,train
+GSE215994,2,3780,2,Visium,Homo sapiens,hesrt,train
+GSE216189,2,7357,2,Visium,Mus musculus,hesrt,train
+GSE216214,8,8465,8,Visium,Mus musculus,hesrt,train
+GSE216542,4,24815,4,Visium,Mus musculus,hesrt,train
+GSE216992,4,3151,4,Visium,Homo sapiens,hesrt,val
+GSE217058,8,21537,8,Visium,Mus musculus,hesrt,train
+GSE217237,18,19813,18,Visium,Homo sapiens,sda-all,train
+GSE217414,4,10674,4,Visium,Homo sapiens,hesrt,test
+GSE217615,13,6755,13,Visium,Mchenga conophoros,hesrt,val
+GSE217664,3,2686481,0,Other,Mus musculus,sda-all,train
+GSE217828,2,5649,2,Visium,Mus musculus,hesrt,train
+GSE217843,2,7266,2,Visium,Mus musculus,hesrt;sda-all,train
+GSE217847,13,149346,0,Other,Homo sapiens,sda-all,train
+GSE218046,2,6380,2,Visium,Mus musculus,hesrt,train
+GSE218539,12,12236,12,Visium,Homo sapiens,sda-all,train
+GSE218761,3,7086,3,Visium,Mus musculus,hesrt,test
+GSE218951,8,21906,8,Visium,Homo sapiens,sda-all,train
+GSE218970,24,38753,24,Visium,Hordeum vulgare,sda-all,train
+GSE219120,24,25136,24,Visium,Homo sapiens,hesrt,train
+GSE220218,4,6221,4,Visium,Sus scrofa,hesrt,train
+GSE220572,2,1312,2,Visium,Homo sapiens,hesrt,train
+GSE220799,4,8378,4,Visium,Mus musculus,hesrt,train
+GSE220817,1,929,0,Visium,Schmidtea mediterranea,sda-all,train
+GSE220978,4,17319,4,Visium,Homo sapiens,hesrt,train
+GSE221106,8,304385,0,MERFISH/MERSCOPE,Mus musculus,sda-all,val
+GSE221359,8,10919,8,Visium,Mus musculus,hesrt,train
+GSE221571,14,44365,14,Visium,Mus musculus,hesrt,train
+GSE222322,20,85100,20,Visium,Homo sapiens,hesrt,val
+GSE222383,1,74816,0,Stereo-seq,Mus musculus,sda-all,train
+GSE222410,16,39429,16,Visium,Mus musculus,hesrt,train
+GSE222981,3,8888,3,Visium,Mus musculus,hesrt,train
+GSE223020,15,6577,0,ST (legacy),Homo sapiens,sda-all,train
+GSE223066,8,21260,8,Visium,Mus musculus,hesrt,train
+GSE223501,12,635688,0,Slide-seq,Homo sapiens,sda-all,train
+GSE223559,8,22380,8,Visium,Homo sapiens,hesrt,train
+GSE223560,11,25323,11,Visium,Mus musculus,hesrt,test
+GSE223813,7,7522,7,Visium,Mus musculus,sda-all,train
+GSE224210,4,8557,4,Visium,Homo sapiens,hesrt,train
+GSE224336,2,2412,2,Visium,Homo sapiens,hesrt,train
+GSE224360,4,9680,4,Visium,Mus musculus,sda-all,train
+GSE224411,3,6229,3,Visium,Homo sapiens,hesrt,test
+GSE224477,3,7330,3,Visium,Homo sapiens,hesrt,test
+GSE225475,6,7570,6,Visium,Homo sapiens,sda-all,val
+GSE225690,4,4526,4,Visium,Homo sapiens,hesrt,train
+GSE225766,11,16223,10,Visium,Mus musculus,hesrt;sda-all,test
+GSE225857,6,22260,6,Visium,Homo sapiens,hesrt,train
+GSE226097,1,55290,0,Slide-seq,Arabidopsis thaliana,sda-all,test
+GSE226208,2,3731,2,Visium,Mus musculus,sda-all,train
+GSE226430,3,69039,0,Stereo-seq,Mus musculus,sda-all,train
+GSE226533,2,8296,2,Visium,Homo sapiens,hesrt,train
+GSE226663,8,24258,8,Visium,Homo sapiens,hesrt,train
+GSE226760,8,4118,8,Visium,Mus musculus,hesrt,train
+GSE226997,4,16096,4,Visium,Homo sapiens,hesrt,train
+GSE227019,3,7307,3,Visium,Homo sapiens,hesrt,test
+GSE227046,7,637299,1,Other;Visium,Mus musculus,hesrt;sda-all,train
+GSE227332,6,16507,6,Visium,Mus musculus,hesrt,test
+GSE227598,5,19743,5,Visium,Mus musculus,hesrt,train
+GSE227742,4,18515,4,Visium,Mus musculus,hesrt,train
+GSE228056,4,5438,4,Visium,Homo sapiens,hesrt,train
+GSE228169,2,7349,2,Visium,Homo sapiens,hesrt,train
+GSE228195,9,30193,9,Visium,Mus musculus,hesrt,val
+GSE228360,12,30890,12,Visium,Homo sapiens,sda-all,val
+GSE228394,3,11443,3,Visium,Mus musculus,hesrt,train
+GSE228516,1,2116,1,Visium,Mus musculus,hesrt,train
+GSE228534,4,4532,4,Visium,Mus musculus,sda-all,test
+GSE228685,1,3584,1,Visium,Homo sapiens,hesrt,train
+GSE228982,4,4583,4,Visium,Homo sapiens,hesrt,train
+GSE229175,4,2010,4,Visium,Ciona intestinalis,hesrt,train
+GSE229508,2,2222,2,Visium,Mus musculus,hesrt;sda-all,train
+GSE229635,3,8317,3,Visium,Electrophorus voltai,hesrt,train
+GSE229699,5,6156,5,Visium,Mus musculus,hesrt,train
+GSE229823,3,6673,3,Visium,Homo sapiens,hesrt,train
+GSE229877,4,5822,0,Visium,Homo sapiens,sda-all,train
+GSE230098,4,16288,4,Visium,Mus musculus,hesrt,train
+GSE230207,4,17930,4,Visium,Homo sapiens,hesrt,train
+GSE230282,1,4397,1,Visium,Homo sapiens,hesrt,train
+GSE230424,4,15489,4,Visium,Homo sapiens,hesrt,train
+GSE230776,1,20983,0,Slide-seq,Gallus gallus,sda-all,train
+GSE230778,4,17282,0,Visium,Gallus gallus,sda-all,train
+GSE231385,1,3532,1,Visium,Homo sapiens,hesrt,train
+GSE231496,1,882,1,Visium,Homo sapiens,sda-all,train
+GSE231998,1,62453,0,Xenium,Homo sapiens,sda-all,train
+GSE232477,1,73,0,Visium,Homo sapiens,sda-all,train
+GSE232734,2,2714,2,Visium,Homo sapiens,hesrt,train
+GSE232766,4,8550,4,Visium,Homo sapiens,hesrt,train
+GSE232910,19,67176,19,Visium,Homo sapiens;Mus musculus,hesrt,train
+GSE233208,119,327700,0,Visium,Homo sapiens;Mus musculus,sda-all,train
+GSE233223,1,4988,0,MERFISH/MERSCOPE,Mus musculus,sda-all,train
+GSE233254,2,4634,2,Visium,Mus musculus,hesrt,test
+GSE233293,13,12245,13,Visium,Homo sapiens,hesrt,train
+GSE233513,4,10312,4,Visium,Mus musculus,hesrt,val
+GSE233571,12,3420,0,Visium,Rattus norvegicus,sda-all,train
+GSE234035,16,15719,16,Visium,Homo sapiens,hesrt,test
+GSE234157,1,2733,1,Visium,Mus musculus,hesrt,train
+GSE234199,8,13792,8,Visium,Mus musculus,hesrt,val
+GSE234253,4,186014,0,Slide-seq,Mus musculus,sda-all,train
+GSE234266,2,2592,2,Visium,Mus musculus,hesrt,train
+GSE234271,3,1910,3,Visium,Mus musculus,hesrt,train
+GSE234713,9,482277,0,CosMx,Homo sapiens,sda-all,train
+GSE234774,24,59024,24,Visium,Mus musculus,hesrt,train
+GSE234885,2,5938,2,Visium,Homo sapiens,sda-all,train
+GSE235247,4,5961,4,Visium,Mus musculus,hesrt,test
+GSE235315,7,25435,7,Visium,Homo sapiens,hesrt,train
+GSE235583,24,27870,24,Visium,Homo sapiens,hesrt,train
+GSE235672,20,44994,20,Visium,Homo sapiens,hesrt,train
+GSE235743,3,1714,3,Visium,Mus musculus,hesrt,train
+GSE235896,22,166292,17,Other;Visium,Homo sapiens;Mus musculus,hesrt;sda-all,train
+GSE236171,4,6882,4,ST (legacy);Visium,Mus musculus,hesrt,val
+GSE236424,23,32767,23,Visium,Mus musculus,hesrt,train
+GSE236660,8,21165,8,Visium,Homo sapiens,hesrt,train
+GSE236681,4,10466,4,Visium,"Homo sapiens
+Mus musculus",sda-all,train
+GSE236698,2,5327,2,Visium,Homo sapiens,hesrt,test
+GSE236890,4,16067,4,Visium,Mus musculus,sda-all,train
+GSE236963,11,30380,11,Visium,Mus musculus,hesrt,train
+GSE237086,5,802315,0,MERFISH/MERSCOPE,Mus musculus,sda-all,train
+GSE237119,2,4374,2,Visium,Mus musculus,hesrt,train
+GSE237183,19,39566,19,Visium,Homo sapiens,hesrt,test
+GSE237308,4,6403,0,Visium,Mus musculus,sda-all,train
+GSE237771,2,654,2,Visium,Homo sapiens,hesrt,train
+GSE238004,4,4485,4,Visium,Mus musculus,hesrt,train
+GSE238145,10,72982,0,Visium,Homo sapiens,sda-all,train
+GSE238264,6,14286,6,Visium,Homo sapiens,sda-all,test
+GSE240015,2,4402,2,Visium,Mus musculus,hesrt,train
+GSE240102,20,38620,18,Visium,Medicago truncatula,hesrt;sda-all,test;train
+GSE240271,8,607096,0,Slide-seq,Mus musculus,sda-all,train
+GSE240715,4,4598,0,Visium,Mus musculus,sda-all,train
+GSE240843,1,33303,0,Stereo-seq,Homo sapiens,sda-all,train
+GSE241124,16,25969,16,Visium,Homo sapiens,hesrt,train
+GSE241346,1,1165,1,Visium,Homo sapiens,hesrt,train
+GSE242058,8,17604,8,Visium,Rattus norvegicus,hesrt,train
+GSE242214,6,16794,6,Visium,Mus musculus,hesrt,val
+GSE242249,1,2945,0,Visium,Homo sapiens,sda-all,val
+GSE242270,1,4443,1,Visium,Sus scrofa,hesrt,train
+GSE242311,16,41376,16,Visium,Homo sapiens,hesrt,train
+GSE242352,17,52440,17,Visium,Homo sapiens,hesrt,train
+GSE242471,4,11703,4,Visium,Mus musculus,hesrt,train
+GSE243022,4,3581,4,Visium,Homo sapiens,hesrt,train
+GSE243120,5,337888,0,MERFISH/MERSCOPE,Mus musculus,sda-all,train
+GSE243140,16,47062,16,Visium,Mus musculus,hesrt,train
+GSE243168,1,142272,1,Xenium,Homo sapiens,sda-all,test
+GSE243179,2,3898,2,Visium,Homo sapiens,hesrt,train
+GSE243225,1,1089,1,Visium,Ambystoma mexicanum,hesrt,train
+GSE243275,1,4992,1,Visium,Homo sapiens,hesrt,train
+GSE243280,2,286532,2,Xenium,Homo sapiens,hesrt,train
+GSE243291,2,5022,2,Visium,Homo sapiens,hesrt,train
+GSE243367,9,14323,9,Visium,Homo sapiens,hesrt,train
+GSE243981,3,7004,3,Visium,Homo sapiens,hesrt,train
+GSE244014,8,12771,8,Visium,Mus musculus,hesrt,val
+GSE244084,4,4238,4,Visium,Homo sapiens,hesrt,train
+GSE244536,4,16690,3,Visium,Mus musculus,sda-all,test
+GSE244641,6,8949,6,Visium,Mus musculus,hesrt;sda-all,train
+GSE244650,13,17541,13,Visium,Mus musculus,hesrt,train
+GSE244659,2,77163,0,Other,Mus musculus,sda-all,train
+GSE244723,4,217,4,ST (legacy),Homo sapiens,hesrt,train
+GSE244803,8,366345,0,Slide-seq,Mus musculus,sda-all,train
+GSE245097,4,10662,4,Visium,Mus musculus,hesrt,train
+GSE245111,4,176854,0,Slide-seq,Mus musculus,sda-all,train
+GSE245112,4,2745,4,Visium,Mus musculus,sda-all,train
+GSE245263,1,2158,1,Visium,Mus musculus,hesrt,train
+GSE245274,46,150681,46,Visium,Mus musculus,hesrt,val
+GSE245313,3,5195,3,Visium,Xenopus laevis,hesrt,train
+GSE245388,8,1921,8,Visium,Homo sapiens,hesrt,train
+GSE245469,4,6357,4,Visium,Mus musculus,hesrt,train
+GSE245582,24,33472,24,Visium,Mus musculus,hesrt,test
+GSE245620,4,12284,4,Visium,Homo sapiens,hesrt,train
+GSE245704,1,2560,1,Visium,Homo sapiens,hesrt,train
+GSE245908,2,4248,2,Visium,Homo sapiens,hesrt,train
+GSE246495,8,17533,8,Visium,Homo sapiens,hesrt,train
+GSE246518,11,30014,4,Visium,Homo sapiens,hesrt;sda-all,train
+GSE246584,4,790374,4,Xenium,Mus musculus,sda-all,train
+GSE246770,8,15862,0,Visium,Mus musculus,sda-all,train
+GSE247450,3,227437,0,MERFISH/MERSCOPE,Mus musculus,sda-all,train
+GSE247834,10,28202,0,Other,Mus musculus,sda-all,train
+GSE248077,13,27800,13,Visium,Mus musculus,hesrt,train
+GSE248082,13,49525,13,Visium,Homo sapiens,sda-all,train
+GSE248205,8,16985,8,Visium,Homo sapiens,hesrt,test
+GSE248230,1,510,1,Visium,Homo sapiens,hesrt,train
+GSE248347,2,3789,2,Visium,Mus musculus,hesrt,train
+GSE248356,3,14359,3,Visium,Mus musculus,hesrt,train
+GSE248517,8,5895,8,Visium,Mus musculus,hesrt,train
+GSE248545,4,14223,4,Visium,Homo sapiens,hesrt,test
+GSE248608,6,8530,6,Visium,Homo sapiens,hesrt,train
+GSE248646,2,3803,2,Visium,Rattus norvegicus,hesrt,train
+GSE248953,2,5559,2,Visium,"Homo sapiens
+Sus scrofa",sda-all,train
+GSE249121,20,47699,20,Visium,Mus musculus,hesrt,train
+GSE249279,4,3545,4,Visium,Homo sapiens,sda-all,train
+GSE249403,20,55436,20,Visium,Mus musculus,sda-all,val
+GSE249729,3,10018,3,Visium,Homo sapiens,hesrt,train
+GSE249803,4,12936,4,Visium,Mus musculus,hesrt,train
+GSE249965,3,6291,3,Visium,Homo sapiens,hesrt,train
+GSE250138,23,23096,23,Visium,Homo sapiens,hesrt,train
+GSE250163,5,13620,5,Visium,Homo sapiens,hesrt,test
+GSE250346,45,1868035,25,Xenium,Homo sapiens,sda-all,train
+GSE250398,8,21501,8,Visium,Mus musculus,hesrt,train
+GSE250521,16,57997,16,Visium,Homo sapiens,hesrt,train
+GSE250636,9,15849,9,Visium,Homo sapiens,hesrt,train
+GSE251693,2,5759,2,Visium,Homo sapiens,hesrt,train
+GSE251926,19,1097769,0,Other,Homo sapiens,sda-all,train
+GSE251938,1,467969,1,Xenium,Homo sapiens,sda-all,train
+GSE251950,10,32291,10,Visium,Homo sapiens,hesrt,train
+GSE252090,23,315116,0,Other,Homo sapiens,sda-all,val
+GSE252108,2,2278,0,Visium,Homo sapiens,sda-all,train
+GSE252113,5,8225,5,Visium,Homo sapiens,hesrt,train
+GSE252176,4,13620,4,Visium,Homo sapiens,hesrt,val
+GSE253080,16,44272,16,Visium,Homo sapiens,hesrt,test
+GSE253199,12,36448,12,Visium,Homo sapiens,hesrt,train
+GSE253378,5,16092,5,Visium,Homo sapiens; Mus musculus;Mus musculus,hesrt,train
+GSE253428,1,2807,1,Visium,Mus musculus,sda-all,train
+GSE253439,4,249320,0,CosMx,Homo sapiens,sda-all,train
+GSE253474,116,156053,0,CosMx,Homo sapiens,sda-all,train
+GSE253520,3,1306,3,Visium,Mus musculus,hesrt,train
+GSE253585,20,60285,20,Visium,Rattus norvegicus,hesrt,test
+GSE253710,12,23963,12,Visium,Mus musculus,sda-all,train
+GSE253850,4,6984,4,Visium,Homo sapiens,sda-all,train
+GSE253852,2,531228,2,Visium HD,Mus musculus,sda-all,train
+GSE253951,2,82073,2,Xenium,Mus musculus,sda-all,train
+GSE254056,2,72577,0,Stereo-seq,Mus musculus,sda-all,val
+GSE254087,2,214837,2,Xenium,Mus musculus,sda-all,train
+GSE254164,4,9340,4,Visium,Mus musculus,sda-all,train
+GSE254364,2,7230,2,Visium,Homo sapiens,hesrt,test
+GSE254652,23,45009,23,Visium,Mus musculus,hesrt,train
+GSE254829,13,30150,13,Visium,Homo sapiens,hesrt,train
+GSE254861,2,10568,2,Visium,Mus musculus,sda-all,train
+GSE255217,4,4234,4,Visium,Homo sapiens,sda-all,train
+GSE255370,28,57217,28,Visium,Mus musculus,hesrt,train
+GSE255407,3,380400,3,Xenium,Mus musculus,sda-all,train
+GSE255552,2,3266,2,Visium,Mus musculus,hesrt,train
+GSE255892,5,6704159,0,MERFISH/MERSCOPE,Mus musculus,sda-all,train
+GSE255942,2,6750,2,Visium,Mus musculus,sda-all,train
+GSE255953,7,384129,0,Xenium,Mus musculus,sda-all,train
+GSE256234,4,18539,4,Visium,Mus musculus,sda-all,train
+GSE256318,7,88271511,0,Stereo-seq,Mus musculus,sda-all,test
+GSE256319,1,161510,0,Stereo-seq,Mus musculus,sda-all,val
+GSE256397,16,22788,16,Visium,Mus musculus,hesrt,train
+GSE256505,2,2903,0,Visium,Mus musculus,sda-all,train
+GSE258959,4,11130,4,Visium,Mus musculus,hesrt,train
+GSE259363,4,13640,4,Visium,Mus musculus,hesrt,train
+GSE259405,12,27538,12,Visium,Mus musculus,hesrt,train
+GSE260452,55,5846819,55,Xenium,Homo sapiens,sda-all,val
+GSE260779,1,75179,0,Stereo-seq,"Homo sapiens
+Mus musculus",sda-all,test
+GSE260801,10,385428,0,Slide-seq,Mus musculus,sda-all,test
+GSE260847,8,16387,8,Visium,Rattus norvegicus,hesrt,train
+GSE260926,1,88814,1,Visium HD,Homo sapiens,sda-all,train
+GSE260998,2,1978,2,Visium,Mus musculus,hesrt,train
+GSE261085,1,2292759,0,Other,Homo sapiens,sda-all,train
+GSE261487,1,2823,1,BMK S1000,Rattus norvegicus,hesrt,train
+GSE261545,1,2802,1,Visium,Homo sapiens,hesrt,train
+GSE261872,4,8748,4,Visium,Mus musculus,hesrt,train
+GSE261890,2,391157,0,Other,Mus musculus,sda-all,train
+GSE261958,22,81914,22,Visium,Homo sapiens,hesrt,train
+GSE262082,1,1162,1,Visium,Homo sapiens,hesrt,train
+GSE262083,2,158207,0,MERFISH/MERSCOPE,Mus musculus,sda-all,val
+GSE262162,2,79821,2,CosMx,Homo sapiens,sda-all,test
+GSE262245,2,3704,2,Visium,Homo sapiens,hesrt,train
+GSE262276,1,4763,1,Visium,Homo sapiens,hesrt,train
+GSE262322,1,109949,0,Stereo-seq,Gallus gallus,sda-all,train
+GSE262430,9,33454,9,Visium,Rattus norvegicus,hesrt,val
+GSE262569,2,4391,2,Visium,Mus musculus,sda-all,train
+GSE262998,4,5212,4,Visium,Homo sapiens,sda-all,train
+GSE263034,25,123237,25,Visium,Homo sapiens,hesrt,train
+GSE263079,14,179867,2,Visium,Homo sapiens,sda-all,train
+GSE263088,4,9957,4,Visium,Mus musculus,sda-all,train
+GSE263196,5,15774,5,Visium,Homo sapiens,sda-all,train
+GSE263281,8,4903,8,Visium,Canis lupus familiaris,hesrt,train
+GSE263333,4,16543,0,Visium,Mus musculus,sda-all,train
+GSE263450,6,266668,0,Stereo-seq,Mus musculus,sda-all,test
+GSE263498,2,468671,2,Xenium,Homo sapiens,sda-all,train
+GSE263536,1,4996,1,Visium,Mus musculus,hesrt,train
+GSE263591,1,21457,0,CosMx,Homo sapiens,sda-all,train
+GSE263658,2,3398,2,Visium,Mus musculus,hesrt,train
+GSE263793,7,931412,0,CosMx;Stereo-seq,Mus musculus,sda-all,train
+GSE263860,1,3472,1,Visium,Homo sapiens,hesrt,train
+GSE263920,8,29547,8,Visium,Homo sapiens,hesrt,val
+GSE264107,2,5836,0,Visium,Marmota monax,sda-all,train
+GSE264233,3,5038,3,Visium,Homo sapiens,hesrt,val
+GSE264331,14,22361,14,Visium,Homo sapiens,hesrt;sda-all,train
+GSE264334,1,30802,1,Xenium,Homo sapiens,sda-all,train
+GSE264398,2,7951,2,Visium,Homo sapiens,hesrt,train
+GSE264425,2,1845098,2,Xenium,Homo sapiens,sda-all,train
+GSE264692,10,43115,10,Visium,Homo sapiens,hesrt,train
+GSE265828,4,5996,4,Visium,Mus musculus,sda-all,val
+GSE266007,7,5227,7,Visium,Zea mays,sda-all,train
+GSE266136,4,16334,4,Visium,Mus musculus,hesrt,val
+GSE266147,13,36247,0,Visium,Mus musculus,sda-all,train
+GSE266244,12,2926833,8,Other;Visium,Homo sapiens;Mus musculus,hesrt;sda-all,train
+GSE266518,4,7516,4,Visium,Mus musculus,sda-all,val
+GSE266585,14,37061,14,Visium,Canis lupus familiaris,sda-all,train
+GSE266604,2,24677,2,Visium,Homo sapiens,hesrt,train
+GSE266680,1,263684,1,Visium HD,Homo sapiens,sda-all,train
+GSE266688,4,758714,0,MERFISH/MERSCOPE,Mus musculus,sda-all,train
+GSE266689,19,2422242,19,Xenium,Mus musculus,sda-all,train
+GSE266969,13,955003,13,Xenium,Mus musculus,sda-all,train
+GSE267315,4,282226,0,Stereo-seq,Homo sapiens,sda-all,train
+GSE267401,4,17052,4,Visium,Homo sapiens,hesrt,train
+GSE267534,3,4415,3,Visium,Mus musculus,sda-all,train
+GSE267806,6,21724,6,Visium,Homo sapiens,hesrt,train
+GSE267904,24,95190,24,Visium,Mus musculus,hesrt,train
+GSE267960,2,9404,2,Visium,Homo sapiens,hesrt,train
+GSE268014,28,420798,28,Visium;Visium HD,Homo sapiens,sda-all,train
+GSE268015,1,2104,1,Visium,Homo sapiens,sda-all,train
+GSE268018,38,73492,0,ST (legacy),"Plasmodium berghei ANKA
+Mus musculus",sda-all,train
+GSE268049,15,9524,15,Visium,Homo sapiens,hesrt,train
+GSE268068,4,11270,4,Visium,Mus musculus,hesrt,train
+GSE268312,30,101035,30,Visium,"Homo sapiens
+Mus musculus;Homo sapiens/Mus musculus xenograft;Mus musculus",sda-all,train
+GSE268427,3,12795,3,Visium,Homo sapiens,hesrt,test
+GSE268492,2,35112,0,MERFISH/MERSCOPE,Mus musculus,sda-all,train
+GSE268523,6,13805,6,Visium,Homo sapiens,hesrt,train
+GSE268577,3,1650,3,Visium,Homo sapiens,hesrt,train
+GSE268779,7,25133,7,Visium,Mus musculus,hesrt,train
+GSE268847,2,5848,2,Visium,"Homo sapiens
+Mus musculus;Mus musculus",sda-all,train
+GSE269043,8,10025,8,Visium,Mus musculus,sda-all,train
+GSE269054,26,59770,26,Visium,Mus musculus,hesrt,train
+GSE269063,2,1360,2,Visium,Mus musculus,hesrt,train
+GSE269283,4,6619,4,Visium,Mus musculus,hesrt,train
+GSE269332,12,3839,12,Visium,Mus musculus,hesrt,train
+GSE269354,2,106304,0,Xenium,Homo sapiens,sda-all,train
+GSE269377,4,3697,4,Visium,Mus musculus,hesrt,train
+GSE269379,1,302297,1,Visium HD,Homo sapiens,sda-all,train
+GSE269543,4,13470,4,Visium,Mus musculus,hesrt,train
+GSE269545,4,9977,4,Visium,Mus musculus,hesrt,train
+GSE269576,4,537,4,Visium,Mus musculus,hesrt,train
+GSE269617,35,10901441,0,MERFISH/MERSCOPE,Mus musculus,sda-all,train
+GSE269695,5,2054,5,Visium,Homo sapiens,hesrt,val
+GSE269719,12,1409439,12,Xenium,Mus musculus,sda-all,val
+GSE269875,15,16559,15,Visium,Homo sapiens;Mus musculus,hesrt,train
+GSE269906,12,967020,0,Stereo-seq,Homo sapiens,sda-all,train
+GSE270389,4,11278,4,Visium,Mus musculus,hesrt,train
+GSE270678,72,152164,72,Visium,Homo sapiens,hesrt,train
+GSE271011,7,5288,7,Visium,Mus musculus,sda-all,train
+GSE271077,14,17319,14,Visium,Mus musculus,sda-all,train
+GSE271118,21,120448,0,MERFISH/MERSCOPE,Homo sapiens,sda-all,train
+GSE271150,15,43691,15,Visium,Homo sapiens,sda-all,train
+GSE271370,23,95175,23,Visium,Homo sapiens,sda-all,test
+GSE271422,3,4459,3,Visium,Homo sapiens,hesrt,train
+GSE271693,6,521938,6,Xenium,Mus musculus,sda-all,train
+GSE271725,2,326398,0,Stereo-seq,Triticum aestivum,sda-all,val
+GSE271795,4,7458,4,Visium,Mus musculus,sda-all,train
+GSE271824,3,304388,3,Xenium,Homo sapiens,sda-all,train
+GSE271936,3,255419,3,Xenium,Homo sapiens,sda-all,train
+GSE272236,8,17800,8,Visium,Mus musculus,sda-all,train
+GSE272303,8,455729,8,Xenium,Mus musculus,sda-all,test
+GSE272334,16,43213,16,Visium,Homo sapiens,hesrt,train
+GSE272337,2,1430773,2,Xenium,Mus musculus,sda-all,train
+GSE272421,1,47829,0,Stereo-seq,Homo sapiens,sda-all,val
+GSE272564,4,6446,4,Visium,Mus musculus,hesrt,train
+GSE272833,4,6692,4,Visium,Homo sapiens,hesrt,train
+GSE272960,2,2746,2,Visium,Homo sapiens,sda-all,val
+GSE273275,2,8102,2,Visium,Homo sapiens,hesrt,train
+GSE273378,16,45354,16,Visium,Homo sapiens,hesrt,train
+GSE273432,4,17702,4,Visium,Homo sapiens,hesrt,train
+GSE273439,4,9445,4,Visium,Mus musculus,hesrt,train
+GSE273489,4,11947,4,Visium,Mus musculus,hesrt,train
+GSE273530,1,9231,0,CosMx,Mus musculus,sda-all,train
+GSE273557,4,151318,0,Xenium,Homo sapiens,sda-all,train
+GSE273606,2,461613,0,MERFISH/MERSCOPE,Mus musculus,sda-all,test
+GSE273952,8,38681,8,Visium,Homo sapiens,hesrt,train
+GSE273978,8,17464,8,Visium,Mus musculus,hesrt,train
+GSE274042,2,111966,0,MERFISH/MERSCOPE,Mus musculus,sda-all,train
+GSE274051,10,60741,10,Visium,Homo sapiens,hesrt,train
+GSE274059,6,2862,6,Visium,Mus musculus,hesrt,train
+GSE274103,5,23436,5,Visium,Homo sapiens,hesrt,train
+GSE274314,14,16654,14,Visium,Homo sapiens,hesrt,train
+GSE274447,1,39862,0,Stereo-seq,Mus musculus,sda-all,train
+GSE274489,4,5677,4,Visium,Homo sapiens,hesrt,train
+GSE274497,1,375,1,Visium,Mus musculus,hesrt,train
+GSE274509,4,9140,4,Visium,Mus musculus,hesrt,train
+GSE274557,57,149088,57,Visium,Homo sapiens,hesrt,train
+GSE274572,4,9722,4,Visium,Homo sapiens,hesrt,train
+GSE274605,8,25891,8,Visium,Mus musculus,sda-all,train
+GSE274617,1,392164,0,MERFISH/MERSCOPE,Mus musculus,sda-all,train
+GSE274623,8,806246,8,Xenium,Homo sapiens,sda-all,train
+GSE274641,9,24015,0,Other,Homo sapiens;Mus musculus,sda-all,train
+GSE274657,4,15234,4,Visium,Homo sapiens,hesrt,train
+GSE274665,4,13250,4,Visium,Homo sapiens,hesrt,train
+GSE274673,6,710700,6,Xenium,Homo sapiens,sda-all,train
+GSE274697,6,24195,6,Visium,Mus musculus,sda-all,val
+GSE274767,2,6200,2,Visium,Mus musculus,hesrt,val
+GSE274782,12,24438,12,Visium,Mus musculus,hesrt,train
+GSE274970,1,315012,0,Stereo-seq,Gallus gallus,sda-all,train
+GSE275026,8,952393,0,MERFISH/MERSCOPE,Mus musculus,sda-all,val
+GSE275125,4,7271,4,Visium,Mus musculus,hesrt,train
+GSE275131,4,11929,4,Visium,Mus musculus,hesrt,test
+GSE275144,2,4052,2,Visium,Homo sapiens,hesrt,train
+GSE275201,2,5555,2,Visium,Mus musculus,hesrt,val
+GSE275252,1,1852,1,Visium,Mus musculus,hesrt,train
+GSE275405,4,14605,4,Visium,Mus musculus,hesrt,train
+GSE275590,2,6103,2,Visium,Mus musculus,hesrt,train
+GSE275954,9,83132,0,MERFISH/MERSCOPE,Mus musculus,sda-all,train
+GSE276083,7,377446,0,CosMx,Homo sapiens,sda-all,train
+GSE276273,1,295245,1,Xenium,Mus musculus,sda-all,train
+GSE276542,9,31030,9,Visium,Homo sapiens,sda-all,train
+GSE276841,2,7629,2,Visium,Homo sapiens,hesrt,train
+GSE276866,8,39580,0,Visium,Mus musculus,sda-all,test
+GSE276934,1,702244,1,Visium HD,Homo sapiens,hesrt,train
+GSE277032,16,27815,16,Visium,Homo sapiens,hesrt,test
+GSE277106,2,7846,2,Visium,Mus musculus,hesrt,train
+GSE277116,27,72307,27,Visium,Homo sapiens,hesrt,test
+GSE277196,1,5043205,0,Stereo-seq,Mus musculus,sda-all,val
+GSE277197,1,7242576,0,Stereo-seq,Mus musculus,sda-all,train
+GSE277246,2,2263,2,Visium,Mus musculus,hesrt,train
+GSE277255,1,4128637,0,Stereo-seq,Mus musculus,sda-all,val
+GSE277387,6,27226,5,Visium,Homo sapiens,sda-all,train
+GSE277441,3,79696,0,CosMx,Homo sapiens,sda-all,train
+GSE277463,6,303150,0,Xenium,Mus musculus,sda-all,train
+GSE277577,7,18701,7,Visium,Mus musculus,sda-all,train
+GSE277936,4,300848,4,Xenium,Mus musculus,hesrt;sda-all,train
+GSE278133,1,58826,0,CosMx,Mus musculus,sda-all,test
+GSE278169,5,3885,5,Visium,Mus musculus,hesrt,train
+GSE278415,4,13046,4,Visium,Mus musculus,sda-all,train
+GSE278431,6,142770,6,Xenium,Mus musculus,sda-all,train
+GSE278603,6,104343,0,Stereo-seq,Mus musculus,sda-all,train
+GSE278611,1,332833,1,Xenium,Mus musculus,sda-all,val
+GSE278614,3,475758,0,CosMx,Homo sapiens,sda-all,test
+GSE278621,1,3738,1,Visium,Homo sapiens,sda-all,train
+GSE278662,4,14013,4,Visium,Homo sapiens,hesrt,train
+GSE278694,21,81846,21,Visium,Homo sapiens,hesrt,train
+GSE278766,1,283682,0,CosMx,Homo sapiens,sda-all,train
+GSE278848,9,87353,0,Visium,Homo sapiens,sda-all,test
+GSE278936,52,134509,52,Visium,Homo sapiens,hesrt,train
+GSE278969,8,387693,0,Xenium,Homo sapiens,sda-all,train
+GSE279181,18,70903,18,Other,Homo sapiens,hesrt,train
+GSE279255,1,399177,1,Visium HD,Mus musculus,hesrt,train
+GSE279273,2,7890,2,Visium,Mus musculus,hesrt,train
+GSE279405,3,6003,3,Visium,Homo sapiens,hesrt,train
+GSE279507,5,14669,5,Visium,Mus musculus,hesrt,train
+GSE279576,6,17017,6,Visium,Homo sapiens,hesrt,train
+GSE279676,4,9747,4,Visium,Mus musculus,hesrt,test
+GSE280088,4,515791,0,Xenium,Mus musculus,sda-all,train
+GSE280177,12,6860209,0,MERFISH/MERSCOPE,Mus musculus,sda-all,test
+GSE280313,3,10794,3,Visium,Homo sapiens,hesrt,train
+GSE280314,3,924597,3,Xenium,Homo sapiens,hesrt,test
+GSE280315,5,2518890,5,Visium HD,Homo sapiens,hesrt,test
+GSE280316,10,45649,10,Visium,Homo sapiens,hesrt,test
+GSE280376,8,312717,5,Xenium,Mus musculus,sda-all,train
+GSE280460,13,912692,13,Xenium,Homo sapiens,sda-all,train
+GSE280515,3,5240,3,Visium,Mus musculus,hesrt,train
+GSE280570,4,14324,4,Visium,Homo sapiens,hesrt,train
+GSE280634,8,694624,0,Xenium,Homo sapiens,sda-all,val
+GSE280709,4,12461,3,Visium,Mus musculus,hesrt;sda-all,train
+GSE280737,11,31255,11,Visium,Sus scrofa,sda-all,train
+GSE280741,6,1062051,6,Xenium,Mus musculus,sda-all,train
+GSE280895,17,4662719,0,MERFISH/MERSCOPE;Xenium,Homo sapiens;Mus musculus,sda-all,test
+GSE280982,2,3835,2,Visium,Homo sapiens,sda-all,train
+GSE280990,10,34939,10,Visium,Homo sapiens,hesrt,train
+GSE281086,4,6420,4,Visium,Mus musculus,hesrt,train
+GSE281265,12,981557,12,Xenium,Mus musculus,sda-all,val
+GSE281288,2,6523,2,Visium,Homo sapiens,sda-all,train
+GSE281317,28,28165,28,Visium,Homo sapiens,sda-all,test
+GSE281488,9,1259829,0,CosMx,Homo sapiens,sda-all,train
+GSE281489,1,38384,0,CosMx,Mus musculus,sda-all,train
+GSE281759,17,27224,17,Visium,Homo sapiens,hesrt,val
+GSE281796,2,4316,2,Visium,Homo sapiens,hesrt,test
+GSE281978,6,8667,6,Visium,Homo sapiens,hesrt,train
+GSE282002,5,14724,5,Visium,Mus musculus,sda-all,val
+GSE282057,4,104781,4,Visium HD,Homo sapiens;Mus musculus,sda-all,train
+GSE282059,1,523855,0,CosMx,Homo sapiens,sda-all,train
+GSE282123,7,3585068,7,Xenium,Homo sapiens,sda-all,val
+GSE282124,1,124938,0,MERFISH/MERSCOPE,Homo sapiens,sda-all,train
+GSE282203,65,232326,65,Visium,Mus musculus,hesrt,train
+GSE282302,105,345586,105,Visium,Homo sapiens,hesrt,train
+GSE282547,17,117564,8,Slide-seq;Visium,Mus musculus,sda-all,train
+GSE282635,1,400,1,Visium,Homo sapiens,hesrt,train
+GSE282639,43,115623,0,CosMx,Homo sapiens,sda-all,train
+GSE282714,6,5384968,0,MERFISH/MERSCOPE,Homo sapiens,sda-all,train
+GSE282721,1,140337,0,CosMx,Homo sapiens,sda-all,train
+GSE282726,4,12087,4,Visium,Mus musculus,hesrt,train
+GSE282867,5,24888,0,Slide-seq,Mus,sda-all,train
+GSE282928,3,30659712,0,Visium HD,Homo sapiens,sda-all,train
+GSE283022,4,7318,4,Visium,Homo sapiens,sda-all,train
+GSE283052,12,26766,12,Visium,Homo sapiens,hesrt,train
+GSE283145,3,4416,3,Visium,Homo sapiens,hesrt,train
+GSE283159,12,2908142,0,Slide-seq,Mus musculus,sda-all,train
+GSE283227,4,772851,4,Visium HD,Homo sapiens,sda-all,train
+GSE283269,6,6582,6,Visium,Homo sapiens,hesrt,test
+GSE283283,168,983455,153,Stereo-seq;Visium,Mus musculus,sda-all,test
+GSE283302,1,992,1,Visium,Mus musculus,hesrt,train
+GSE283333,2,54056,2,BMK S1000,Mus musculus,hesrt,train
+GSE283411,2,133921,0,Slide-seq,Mus musculus,sda-all,train
+GSE283412,8,34971,8,Visium,Homo sapiens,hesrt,train
+GSE283418,10,73951,0,Molecular Cartography,Mus musculus,sda-all,train
+GSE283435,2,534676,2,Visium HD,Mus musculus,sda-all,train
+GSE283497,6,266013,6,Xenium,Homo sapiens,sda-all,train
+GSE283832,7,1360561,0,Xenium,Homo sapiens,sda-all,train
+GSE283863,1,85556,0,CosMx,Mus musculus,sda-all,train
+GSE283872,4,32521,0,Stereo-seq,Mus musculus,sda-all,test
+GSE283883,1,25000000,0,Other,Mus musculus,sda-all,train
+GSE283945,35,120661,35,Visium,Homo sapiens,hesrt,test
+GSE283959,4,10528,4,Visium,Mus musculus,hesrt,train
+GSE283967,3,6379,3,Visium,Homo sapiens,hesrt,train
+GSE284005,17,401794,0,MERFISH/MERSCOPE,Homo sapiens,sda-all,train
+GSE284032,2,37091,0,Stereo-seq,Mus musculus,sda-all,test
+GSE284052,3,13785,0,Other,Solanum lycopersicum,sda-all,train
+GSE284089,1,4992,1,Visium,Homo sapiens,hesrt,train
+GSE284137,395,83306,0,ST (legacy),Mus musculus,sda-all,train
+GSE284353,4,129513,4,Xenium,Mus musculus,sda-all,train
+GSE284571,8,20517,8,Visium,Mus musculus,hesrt,train
+GSE284625,32,101911,32,Visium,Mus musculus,hesrt,train
+GSE284695,8,25817,8,Visium,Mus,sda-all,train
+GSE284741,1,219239,0,Xenium,Mus musculus,sda-all,train
+GSE284747,8,692800,8,Xenium,Mus musculus,sda-all,train
+GSE284989,22,58287,22,Visium,Mus musculus,hesrt,train
+GSE285027,12,3581102,12,Xenium,Mus musculus,sda-all,train
+GSE285158,6,387247,6,Xenium,"Homo sapiens
+Mus musculus",sda-all,train
+GSE285226,2,3322,2,Visium,Homo sapiens,hesrt,test
+GSE285246,9,21523,9,Visium,Homo sapiens,hesrt,test
+GSE285304,6,12970,0,DBiT-seq,Mus musculus,sda-all,train
+GSE285341,4,1156387,4,Xenium,Mus musculus,sda-all,train
+GSE285505,4,12944,4,Visium,Homo sapiens,hesrt,val
+GSE285715,6,17364,6,Visium,Homo sapiens,hesrt,val
+GSE285858,16,32133,16,Visium,Mus musculus,sda-all,train
+GSE285984,8,84591,8,Xenium,Homo sapiens,sda-all,val
+GSE285990,2,108910,0,Stereo-seq,Mus musculus,sda-all,train
+GSE286008,4,12294,4,Visium,Mesocricetus auratus,hesrt,train
+GSE286051,4,1475615,4,Xenium,Mus musculus,sda-all,train
+GSE286085,1,197597,1,Xenium,Mus musculus,sda-all,train
+GSE286184,20,714126,0,Xenium,Homo sapiens,sda-all,test
+GSE286215,2,661374,0,Stereo-seq,Mus musculus,sda-all,test
+GSE286227,2,451639,2,Visium HD,Homo sapiens,hesrt,train
+GSE286250,4,1979,0,ST (legacy),Mus musculus,sda-all,train
+GSE286254,7,570619,7,Xenium,Homo sapiens,sda-all,train
+GSE286413,2,7948,2,Visium,Homo sapiens,hesrt,val
+GSE286452,6,470117,0,Slide-seq,Mus musculus,sda-all,train
+GSE286477,6,14129,6,Visium,Homo sapiens,hesrt,train
+GSE286935,1,103159,0,CosMx,Homo sapiens,sda-all,train
+GSE286964,2,294230,2,Xenium,Homo sapiens,sda-all,train
+GSE287202,4,13430,4,Visium,Mus musculus,hesrt,test
+GSE287278,8,10163,8,Visium,Homo sapiens,hesrt,train
+GSE287384,4,3530,4,Visium,Mus musculus,sda-all,train
+GSE287459,8,27437,8,Visium,Homo sapiens,hesrt,test
+GSE287472,1,64420,0,CosMx,Homo sapiens,sda-all,train
+GSE287499,2,282348,2,Visium HD,Mus musculus,sda-all,train
+GSE287979,1,2182,1,Visium,Homo sapiens,hesrt,train
+GSE288178,1,2500,0,DBiT-seq,Homo sapiens,sda-all,train
+GSE288200,1,1058,1,Visium,Mus musculus,sda-all,train
+GSE288235,3,12882,0,Other,Homo sapiens,sda-all,test
+GSE288365,18,137375,0,Visium,Homo sapiens,sda-all,train
+GSE288483,8,15322,8,Visium,Homo sapiens,hesrt,train
+GSE288576,1,40583,0,Slide-seq,Mus musculus,sda-all,train
+GSE288607,9,36114,9,Visium,Homo sapiens,hesrt,val
+GSE288663,6,38965,6,Xenium,Mus musculus,sda-all,val
+GSE288758,2,107163,2,Visium HD,Homo sapiens,hesrt,train
+GSE288888,2,4228,2,Visium,Homo sapiens,hesrt,train
+GSE289001,71,1326201,0,Xenium,Mus musculus,sda-all,train
+GSE289052,6,18489,6,Visium,Mus musculus,sda-all,train
+GSE289054,16,690246,0,Slide-seq,Homo sapiens/Rattus norvegicus xenograft,sda-all,train
+GSE289170,6,17834,6,Visium,Mus musculus,hesrt,test
+GSE289263,8,84488,8,Xenium,Mus musculus,sda-all,train
+GSE289299,1,31731,0,Slide-seq,Schmidtea mediterranea,sda-all,train
+GSE289363,3,14839,3,Visium,Homo sapiens,sda-all,train
+GSE289496,1,3481,1,Visium,Homo sapiens,sda-all,train
+GSE289717,1,671854,1,Visium HD,Homo sapiens,sda-all,train
+GSE289745,11,27830,11,Visium,Homo sapiens,hesrt,train
+GSE289934,2,3757,2,Visium,Mus musculus,hesrt,train
+GSE290041,11,804159,11,Xenium,Homo sapiens,sda-all,train
+GSE290094,7,11327,7,Visium,Mus musculus,hesrt;sda-all,train
+GSE290287,1,336372,1,Visium HD,Mus musculus,hesrt,test
+GSE290324,7,10913,7,Visium,Mus musculus,hesrt;sda-all,train
+GSE290338,2,1170905,2,Visium HD,Mus musculus,hesrt,train
+GSE290577,2,192104,2,Xenium,Homo sapiens,sda-all,train
+GSE290670,8,12483,8,Visium,Homo sapiens,hesrt,train
+GSE290724,2,10861194,0,Visium HD,Homo sapiens,sda-all,val
+GSE290762,4,61172,4,BMK S1000,Mus musculus,hesrt,train
+GSE290924,6,13272,6,Other,Homo sapiens,hesrt,train
+GSE291088,1,93248,1,Visium HD,Mus musculus,sda-all,train
+GSE291200,1,21784,0,Slide-seq,Homo sapiens,sda-all,train
+GSE291210,3,1963273,0,MERFISH/MERSCOPE,Mus musculus,sda-all,train
+GSE291246,17,1784687,17,Xenium,Homo sapiens,sda-all,train
+GSE291308,1,136343,0,CosMx,Mus musculus,sda-all,train
+GSE291378,3,186745,3,Xenium,Mus musculus,sda-all,train
+GSE291385,1,31135,0,Stereo-seq,Mus musculus,sda-all,train
+GSE291460,8,1259872,8,Xenium,Mus musculus,sda-all,train
+GSE291687,2,162407,2,Visium HD,Mus musculus,sda-all,train
+GSE291688,4,752858,4,Xenium,Homo sapiens,sda-all,val
+GSE291813,8,22343,8,Visium,Mus musculus,sda-all,train
+GSE292123,10,230806,10,Xenium,Homo sapiens,sda-all,train
+GSE292156,3,78325,0,Stereo-seq,Homo sapiens,sda-all,train
+GSE292268,2,107256,0,CosMx,Homo sapiens,sda-all,train
+GSE292299,18,148453,18,Visium,Homo sapiens,sda-all,train
+GSE292394,1,69492,0,MERFISH/MERSCOPE,Homo sapiens,sda-all,test
+GSE292706,1,4282,1,Visium,Mus musculus,hesrt,train
+GSE292791,1,131548,0,CosMx,Mus musculus,sda-all,train
+GSE292956,5,21981,5,Visium,Homo sapiens,sda-all,train
+GSE293043,3,172647,0,Stereo-seq,Homo sapiens,sda-all,train
+GSE293065,26,53309,26,Visium,Homo sapiens,sda-all,train
+GSE293124,14,1901559,0,CosMx,Homo sapiens,sda-all,train
+GSE293144,2,2901399,1,Xenium,Mus musculus,sda-all,test
+GSE293199,1,189598,1,Xenium,Homo sapiens,sda-all,train
+GSE293427,11,9872,11,Visium,Homo sapiens,hesrt,train
+GSE293582,4,199680,0,Visium,Homo sapiens,sda-all,train
+GSE293759,3,4738840,0,Xenium,Homo sapiens,sda-all,train
+GSE293783,2,239639,2,Visium HD,Homo sapiens,hesrt,train
+GSE293800,1,77695,1,Xenium,Homo sapiens,sda-all,train
+GSE293896,10,117258,10,Visium,Homo sapiens,hesrt,train
+GSE293970,3,37042,1,Xenium,Homo sapiens,sda-all,val
+GSE294006,3,13583,3,Visium,Homo sapiens,sda-all,train
+GSE294097,4,23007,0,Stereo-seq,Danio rerio,sda-all,val
+GSE294120,2,3175,2,Visium,Mus musculus,hesrt,val
+GSE294212,6,118686,6,Xenium,Ambystoma mexicanum,sda-all,train
+GSE294222,8,17581,8,Visium,Mus musculus,hesrt,train
+GSE294237,1,17160,1,Xenium,Mus musculus,sda-all,test
+GSE294277,10,23245,10,Visium,Homo sapiens,hesrt,test
+GSE294385,37,351048,37,Visium,Homo sapiens,sda-all,train
+GSE294392,35,47164,35,Visium,Hordeum vulgare,sda-all,val
+GSE294442,1,8531,0,Stereo-seq,Homo sapiens,sda-all,train
+GSE294466,32,659048,32,Xenium,Homo sapiens,sda-all,train
+GSE294469,2,35780,0,MERFISH/MERSCOPE,Danio rerio,sda-all,train
+GSE294669,13,32083,13,Visium,Homo sapiens,hesrt,test
+GSE294759,9,562096,0,Stereo-seq,Homo sapiens;Mus musculus,sda-all,train
+GSE294765,6,6926,6,Visium,Mus musculus,sda-all,train
+GSE294814,7,17460,0,DBiT-seq,Mus musculus,sda-all,val
+GSE294844,5,7856,4,Visium,human skin metagenome,hesrt;sda-all,test
+GSE294965,9,3421800,9,Xenium,Homo sapiens,hesrt;sda-all,train
+GSE295043,8,15439,8,Visium,Mus musculus,hesrt,train
+GSE295060,2,5688,2,Visium,Mus musculus,hesrt,train
+GSE295061,2,92679,2,Xenium,Mus musculus,sda-all,train
+GSE295206,16,48278,16,Visium,Homo sapiens,hesrt,train
+GSE295237,4,13803,4,Visium,Homo sapiens,sda-all,train
+GSE295275,2,1821,2,Visium,Hepatitis B virus,sda-all,val
+GSE295606,2,1339453,0,Visium HD,Mus musculus,sda-all,train
+GSE295619,2,4802,2,Visium,Homo sapiens,hesrt,train
+GSE295730,12,1214646,12,Xenium,Mus musculus,sda-all,train
+GSE295815,9,201498,0,Stereo-seq,Mus musculus,sda-all,train
+GSE295862,12,60981,12,Xenium,Homo sapiens,sda-all,train
+GSE295967,16,37823,16,Visium,Mus musculus,sda-all,train
+GSE296053,4,2020169,4,Xenium,Mus musculus,sda-all,train
+GSE296134,8,828663,8,Xenium,Mus musculus,sda-all,test
+GSE296275,4,192377,4,Xenium,Mus musculus,sda-all,train
+GSE296301,2,6149,2,Visium,Mus musculus,sda-all,train
+GSE296331,8,1167645,8,Xenium,Homo sapiens,sda-all,val
+GSE296375,3,10113,3,Visium,Mus musculus,sda-all,train
+GSE296429,1,672776,0,Slide-seq,Homo sapiens,sda-all,train
+GSE296452,2,2083,2,Visium,Homo sapiens,hesrt,train
+GSE296454,3,83007,0,Slide-seq,Mus musculus,sda-all,test
+GSE296517,3,262305,0,CosMx,Homo sapiens,sda-all,train
+GSE296545,4,18872,4,Visium,Mus musculus,hesrt,train
+GSE296577,20,3057564,19,Xenium,Homo sapiens,sda-all,train
+GSE296581,4,3808,4,Visium,Mus musculus,sda-all,train
+GSE296582,6,5096,6,Visium,Mus musculus,hesrt,train
+GSE296613,4,794842,0,Stereo-seq,Mus musculus,sda-all,val
+GSE296623,1,388785,1,Visium HD,Homo sapiens,hesrt,train
+GSE296626,36,152953,36,Visium,Homo sapiens,hesrt,train
+GSE296660,2,5812,2,Visium,Mus musculus,hesrt,train
+GSE296789,21,94953,21,Visium,Homo sapiens,hesrt;sda-all,train
+GSE296797,5,4892,5,Visium,Mus musculus,hesrt,train
+GSE296852,4,2933429,4,Xenium,Homo sapiens,sda-all,train
+GSE296896,12,1530764,0,BMK S1000,Mus musculus,sda-all,test
+GSE296897,36,4592292,0,Other,Mus musculus,sda-all,train
+GSE296975,4,13656,4,Visium,Sus scrofa,hesrt,train
+GSE296982,1,246172,1,Xenium,Mus musculus,sda-all,train
+GSE297058,2,577746,2,Visium HD,Mus musculus,sda-all,train
+GSE297064,2,3524,2,Visium,Homo sapiens,hesrt,train
+GSE297068,6,602821,0,MERFISH/MERSCOPE;Stereo-seq,Mus musculus,sda-all,train
+GSE297081,4,19186,4,Visium,Mus musculus,hesrt,test
+GSE297119,3,24218,3,Visium,Mus musculus,hesrt,train
+GSE297144,8,26611,8,Visium,Homo sapiens,sda-all,train
+GSE297388,4,7509,4,Visium,Mus musculus,sda-all,train
+GSE297459,1,528538,1,Xenium,Homo sapiens,sda-all,val
+GSE297621,2,6971,2,Visium,Mus musculus,hesrt,train
+GSE297667,4,231200,0,Other,Homo sapiens,sda-all,train
+GSE297745,4,10744,4,Visium,Mus musculus,sda-all,train
+GSE297945,34,1170328,8,Xenium,Homo sapiens,sda-all,train
+GSE297947,1,2444,1,Visium,Mus musculus,sda-all,train
+GSE298021,3,444695,0,Stereo-seq,Triticum aestivum,sda-all,train
+GSE298115,6,6479,2,Visium,Mus musculus,hesrt;sda-all,test
+GSE298286,14,39545,14,Visium,Homo sapiens,hesrt,train
+GSE298314,4,863580,0,MERFISH/MERSCOPE,Mus musculus,sda-all,val
+GSE298545,4,3282,4,Visium,Mus musculus,sda-all,test
+GSE298591,2,218537,0,MERFISH/MERSCOPE,Mus musculus,sda-all,train
+GSE298650,5,186047,0,Stereo-seq,Mus musculus,sda-all,train
+GSE298680,24,52646,0,Visium,Mus musculus,sda-all,train
+GSE298689,1,2025,1,Visium,Mus musculus,hesrt,train
+GSE298742,15,5473,15,Visium,Mus musculus,hesrt,train
+GSE298774,9,77728,9,Visium,Homo sapiens,sda-all,test
+GSE298872,4,1165380,4,Visium HD,Homo sapiens,hesrt,train
+GSE298921,2,4031,2,Visium,Mus musculus,hesrt,test
+GSE299025,2,6073,2,Visium,Homo sapiens,hesrt,train
+GSE299027,19,51992,18,Visium,Homo sapiens,sda-all,val
+GSE299051,2,184510,2,Visium HD,Homo sapiens,sda-all,val
+GSE299069,2,497663,2,Xenium,Mus musculus,sda-all,train
+GSE299165,3,13358,3,Visium,Homo sapiens,hesrt,train
+GSE299193,22,1955450,22,Xenium,Homo sapiens,sda-all,train
+GSE299207,1,246079,1,Xenium,Mus musculus,sda-all,train
+GSE299256,1,71399,0,CosMx,Homo sapiens,sda-all,train
+GSE299374,2,6742,2,Visium,Homo sapiens,sda-all,train
+GSE299386,2,200608,0,Stereo-seq,Monodelphis domestica;Mus musculus,sda-all,train
+GSE299434,4,788474,4,Xenium,Mus musculus,sda-all,train
+GSE299494,14,20687,14,Visium,Canis lupus familiaris,sda-all,train
+GSE299573,1,695646,1,Visium HD,Homo sapiens,sda-all,train
+GSE299610,2,12188,2,Visium,Mus musculus,sda-all,train
+GSE299631,37,103461,37,Visium,Homo sapiens;Mus musculus,hesrt,train
+GSE299660,4,17377,4,Visium,Homo sapiens,sda-all,train
+GSE299772,12,46361,12,Visium,Rattus norvegicus,hesrt,train
+GSE299776,1,1570,1,Visium,Homo sapiens,hesrt,train
+GSE299786,4,190038,0,CosMx,Homo sapiens,sda-all,train
+GSE299810,8,450526,8,Xenium,Mus musculus,sda-all,train
+GSE299816,1,330212,1,Visium HD,Mus musculus,hesrt,train
+GSE299886,3,524954,0,MERFISH/MERSCOPE,Homo sapiens,sda-all,test
+GSE299911,2,3858,0,Visium,Mus musculus,sda-all,train
+GSE299970,1,4611,1,Visium,Homo sapiens,hesrt,train
+GSE300007,6,692885,0,Xenium,Homo sapiens,sda-all,train
+GSE300023,7,16075,7,Visium,Mus musculus,sda-all,train
+GSE300112,12,19243,12,Visium,Homo sapiens,hesrt,train
+GSE300147,18,1186916,18,Xenium,Homo sapiens,sda-all,train
+GSE300289,1,822395,0,Slide-seq,Mus musculus,sda-all,train
+GSE300293,19,87900,19,Visium,Mus musculus,hesrt,train
+GSE300303,6,437874,6,Xenium,Mus musculus,sda-all,train
+GSE300380,7,10300,7,Visium,Homo sapiens,hesrt,val
+GSE300434,8,2874777,6,Visium HD,Mus musculus,sda-all,train
+GSE300445,4,11582,4,Visium,Homo sapiens,sda-all,train
+GSE300585,1,4992,1,Visium,Homo sapiens,hesrt,train
+GSE300613,2,2985,2,Visium,Homo sapiens,hesrt,test
+GSE300645,4,18795,4,Visium,Homo sapiens,hesrt,train
+GSE300676,8,33627,7,Visium,Homo sapiens,hesrt;sda-all,train
+GSE300692,1,400147,1,Visium HD,Homo sapiens,sda-all,train
+GSE300851,6,25932,0,Visium,Homo sapiens,sda-all,train
+GSE300895,3,3710896,3,Visium HD,Homo sapiens,hesrt,train
+GSE301012,4,12239,4,Visium,Mus musculus,hesrt,train
+GSE301260,16,50581,16,Visium,Rattus norvegicus,hesrt,train
+GSE301265,8,8295,8,Visium,Homo sapiens,hesrt,train
+GSE301280,24,345897,23,Xenium,Homo sapiens,sda-all,train
+GSE301306,4,6126,4,Visium,Homo sapiens,sda-all,train
+GSE301435,2,394364,0,CosMx,Mus musculus,sda-all,train
+GSE301486,1,80924,1,Visium HD,Homo sapiens,hesrt,val
+GSE301696,4,523080,0,MERFISH/MERSCOPE,Mus musculus,sda-all,train
+GSE301720,8,19047,8,Visium,Homo sapiens,hesrt,train
+GSE301973,2,211291,2,Visium HD,Homo sapiens,hesrt,train
+GSE302128,8,542669,8,Xenium,Mus musculus,sda-all,test
+GSE302160,4,16798,4,Visium,Homo sapiens,hesrt;sda-all,val
+GSE302187,2,10561,0,Visium,"Staphylococcus aureus
+Mus musculus",sda-all,train
+GSE302264,4,375444,4,Xenium,Homo sapiens,sda-all,train
+GSE302356,3,444096,3,Visium;Visium HD;Xenium,Homo sapiens,sda-all,test
+GSE302449,4,12994,4,Visium,Mus musculus,sda-all,test
+GSE302470,2,672115,2,Xenium,Mus musculus,sda-all,train
+GSE302473,2,427184,2,Xenium,Mus musculus,sda-all,train
+GSE302474,2,133378,2,Xenium,Mus musculus,sda-all,train
+GSE302502,12,74830,12,Xenium,Homo sapiens,sda-all,train
+GSE302569,2,988942,2,Visium,Homo sapiens,hesrt,train
+GSE302642,6,134352,0,Xenium,Homo sapiens,sda-all,train
+GSE302677,3,3582,3,Visium,Homo sapiens,sda-all,train
+GSE302815,4,10854,4,Visium,Mus musculus,hesrt,train
+GSE303036,13,19188,13,Visium,Homo sapiens,sda-all,train
+GSE303070,352,846469,0,CosMx,Homo sapiens,sda-all,val
+GSE303162,2,4555,2,Visium,Mus musculus,sda-all,train
+GSE303530,1,2936,1,Visium,Mus musculus,sda-all,train
+GSE303546,5,3223689,5,Visium HD,Homo sapiens,sda-all,test
+GSE303705,4,1644264,4,Visium HD,Mus musculus,hesrt,val
+GSE303764,12,34614,12,Visium,Cavia porcellus,sda-all,test
+GSE303809,5,668441,0,MERFISH/MERSCOPE,Homo sapiens,sda-all,train
+GSE303933,6,28114,6,Visium,Homo sapiens,sda-all,train
+GSE304111,1,44347,0,CosMx,Mus musculus,sda-all,train
+GSE304124,1,724,1,Visium,Homo sapiens,sda-all,train
+GSE304160,4,321016,0,CosMx,Mus musculus,sda-all,train
+GSE304504,4,1813,4,Visium,Macaca mulatta,hesrt,test
+GSE304561,7,17559,7,Visium,Homo sapiens,sda-all,train
+GSE304669,4,4521,4,Visium,Homo sapiens,hesrt,val
+GSE304762,2,176521,2,Xenium,Mus musculus,sda-all,train
+GSE304811,2,516855,2,Xenium,Mus musculus,sda-all,train
+GSE304962,4,1216,4,Visium,Dugesia japonica,hesrt,train
+GSE305111,3,33649,0,Stereo-seq,Sus scrofa,sda-all,train
+GSE305116,2,5775,0,Visium,Homo sapiens,sda-all,val
+GSE305314,4,26143,4,Visium,Rattus norvegicus,hesrt,train
+GSE305393,2,99924,0,CosMx,Homo sapiens,sda-all,val
+GSE305629,2,796763,2,Xenium,Homo sapiens,sda-all,train
+GSE305911,2,5768,2,Visium,Mus musculus,sda-all,train
+GSE305978,1,62476,0,CosMx,Homo sapiens,sda-all,train
+GSE306019,2,6916,2,Visium,Mus musculus,sda-all,train
+GSE306111,5,1125604,0,CosMx,Homo sapiens,sda-all,test
+GSE306130,14,1863397,14,Xenium,Homo sapiens,sda-all,train
+GSE306150,10,441673,10,Xenium,Homo sapiens,sda-all,train
+GSE306288,8,12458,8,Visium,Homo sapiens,sda-all,train
+GSE306327,2,3867,2,Visium,Mus musculus,sda-all,test
+GSE306374,2,104695,2,Visium HD,Homo sapiens,hesrt,test
+GSE306506,7,23331,7,Visium,Homo sapiens,sda-all,train
+GSE306575,9,68957,0,Visium,Homo sapiens;Mus musculus,sda-all,train
+GSE306617,11,48290,11,Visium,Homo sapiens,sda-all,val
+GSE306678,1,249140,1,Visium HD,Mus musculus,hesrt,train
+GSE306706,4,16546,4,Visium,Sus scrofa,sda-all,train
+GSE306833,2,1070743,2,Visium HD,Mus musculus,hesrt,train
+GSE306852,13,569911,13,Xenium,Homo sapiens,sda-all,train
+GSE306881,2,858927,2,Xenium,Homo sapiens,sda-all,val
+GSE307031,6,443362,6,Xenium,Mus musculus,sda-all,train
+GSE307128,4,831332,4,Visium HD,Mus musculus,sda-all,train
+GSE307215,8,2432490,5,Visium HD,Homo sapiens,sda-all,val
+GSE307404,24,1339151,24,Xenium,Homo sapiens,sda-all,train
+GSE307496,2,932981,0,Stereo-seq,Bos taurus,sda-all,train
+GSE307504,2,6043,2,Visium,Homo sapiens,sda-all,train
+GSE307534,56,639816,56,Visium,Homo sapiens,hesrt;sda-all,train
+GSE307586,38,177846,38,Visium,Homo sapiens,hesrt,train
+GSE307588,25,835557,0,Xenium,Homo sapiens,sda-all,train
+GSE307661,3,294802,3,Xenium,Homo sapiens,sda-all,test
+GSE307719,8,3112402,0,MERFISH/MERSCOPE,Mus musculus,sda-all,train
+GSE307744,1,2813,1,Visium,Homo sapiens,sda-all,train
+GSE307817,12,22052,12,Visium,Homo sapiens,sda-all,train
+GSE307866,43,149694,43,Visium,Homo sapiens,hesrt,train
+GSE307895,13,184368,0,Xenium,Homo sapiens,sda-all,train
+GSE307951,1,18863,0,Other,Ceratopteris richardii,sda-all,train
+GSE307990,31,122746,31,Visium,Homo sapiens,hesrt,train
+GSE308146,4,946308,0,CosMx,Homo sapiens,sda-all,train
+GSE308147,2,519274,0,MERFISH/MERSCOPE,Homo sapiens,sda-all,train
+GSE308148,8,2768689,7,Xenium,Homo sapiens,sda-all,train
+GSE308167,3,20774,0,Other,Homo sapiens,sda-all,train
+GSE308260,1,2042,1,Visium,Mus musculus,sda-all,train
+GSE308275,2,3445,2,Visium,Homo sapiens,sda-all,train
+GSE308486,6,16826,6,Visium,Homo sapiens,hesrt,train
+GSE308507,5,6182468,0,Stereo-seq,Mus musculus,sda-all,train
+GSE308623,28,363616,0,ST (legacy),Mus musculus,sda-all,train
+GSE308624,71,200182,0,CosMx,Homo sapiens,sda-all,train
+GSE308697,4,51758,4,Xenium,Homo sapiens,sda-all,train
+GSE308699,5,116878,5,Xenium,Homo sapiens,sda-all,train
+GSE308929,2,553347,2,Visium HD,Homo sapiens,sda-all,train
+GSE308952,1,68159,0,Stereo-seq,Mus musculus,sda-all,train
+GSE308959,3,440858,3,Xenium,Mus musculus,sda-all,train
+GSE309269,2,11769,2,Visium,Homo sapiens,hesrt,test
+GSE309408,8,7616,8,Visium,Anolis carolinensis;Columba livia;Gallus gallus;Taeniopygia guttata,hesrt,train
+GSE309522,16,2221145,0,Xenium,Mus musculus,sda-all,train
+GSE309565,2,106888,2,Visium HD,Mus musculus,sda-all,test
+GSE309857,4,9734,0,Visium,Mus musculus,sda-all,train
+GSE310073,6,13169,6,Visium,Rattus norvegicus,hesrt,train
+GSE310116,4,66755,0,Other,Mus musculus,sda-all,train
+GSE310129,3,112667,0,Stereo-seq,Anas platyrhynchos;Gallus gallus,sda-all,train
+GSE310162,22,2478587,22,Xenium,Homo sapiens,sda-all,train
+GSE310351,6,5675,6,Visium,Homo sapiens,hesrt,train
+GSE310352,8,660190,0,CosMx,Homo sapiens,sda-all,train
+GSE310386,8,144161,1,Xenium,Homo sapiens,sda-all,train
+GSE310392,12,1920805,12,Xenium,Mus musculus,sda-all,train
+GSE310443,2,355282,0,CosMx,Homo sapiens,sda-all,train
+GSE310599,16,1695341,16,Xenium,Mus musculus,sda-all,val
+GSE310610,12,43435,12,Visium,Homo sapiens,hesrt,train
+GSE310658,2,62005,2,Xenium,Mus musculus,sda-all,train
+GSE310797,3,5499,0,Visium,Homo sapiens,sda-all,train
+GSE310921,8,20256,8,Visium,Homo sapiens;Mus musculus,sda-all,train
+GSE311123,1,4992,1,Visium,Homo sapiens,hesrt,val
+GSE311199,7,89984,0,Other,Homo sapiens;Mus musculus,sda-all,train
+GSE311294,5,21073,5,Visium,Homo sapiens,hesrt,train
+GSE311369,1,14886,1,Xenium,Mus musculus,sda-all,train
+GSE311383,3,1558999,3,Visium HD,Homo sapiens,sda-all,train
+GSE311609,41,4882633,41,Xenium,Homo sapiens,sda-all,val
+GSE311636,2,40565,0,CosMx,Homo sapiens,sda-all,val
+GSE311681,1,100627,1,Xenium,Mus musculus,hesrt,train
+GSE311717,15,5156,15,Visium,"Macaca fascicularis
+Sus scrofa",sda-all,train
+GSE311781,10,8970,0,Other,Rattus norvegicus,sda-all,train
+GSE311783,7,7873,7,Visium,Homo sapiens,hesrt,train
+GSE311892,36,415461,0,CosMx,Homo sapiens,sda-all,train
+GSE311909,2,9414,2,Visium,Homo sapiens,hesrt,val
+GSE312053,9,5599035,9,Visium HD,Homo sapiens,hesrt,train
+GSE312129,10,10217,10,Visium,Homo sapiens,hesrt,train
+GSE312168,1,4057,1,Visium,Rattus norvegicus,hesrt,train
+GSE312204,20,207205,20,Visium,Homo sapiens,hesrt,test
+GSE312281,1,639,1,Visium,Mus musculus,sda-all,train
+GSE312327,2,9650,2,Visium,Homo sapiens,sda-all,train
+GSE312358,2,1891259,2,Xenium,Mus musculus,sda-all,train
+GSE312415,60,1201732,0,CosMx,Homo sapiens,sda-all,train
+GSE312420,32,1079345,32,Xenium,Homo sapiens,sda-all,train
+GSE312493,18,188529,0,Xenium,Mus musculus,sda-all,test
+GSE312698,4,552676,0,CosMx,Homo sapiens,sda-all,train
+GSE312910,16,18694,16,Visium,Mus musculus,hesrt,train
+GSE312932,10,115552,10,Xenium,Homo sapiens,sda-all,train
+GSE313006,4,1067018,4,Xenium,Homo sapiens,sda-all,train
+GSE313081,4,2498744,4,Xenium,Mus musculus,sda-all,train
+GSE313338,23,293056,23,Xenium,Ambystoma mexicanum,sda-all,train
+GSE313353,1,300700,1,Visium HD,Mus musculus,sda-all,train
+GSE313407,34,91301,34,Visium,Mus musculus,hesrt,train
+GSE313471,7,13281,7,Visium,Homo sapiens,sda-all,train
+GSE313530,20,35029,20,Visium,Macaca fascicularis;Macaca mulatta;Papio anubis,sda-all,train
+GSE313636,4,928434,4,Xenium,Mus musculus,sda-all,test
+GSE313662,6,977823,6,Xenium,Homo sapiens,sda-all,train
+GSE313694,42,245795,42,Visium,Homo sapiens,sda-all,train
+GSE313700,50,71350,50,CosMx,Mus musculus,sda-all,train
+GSE313704,10,1452965,0,MERFISH/MERSCOPE,Mus musculus,sda-all,train
+GSE313808,2,53300,2,Xenium,Homo sapiens,sda-all,val
+GSE313828,3,1346,3,Visium,Mus musculus,sda-all,train
+GSE313858,3,38402,3,Visium HD,Homo sapiens,hesrt,train
+GSE313918,246,1034910,246,Visium,Homo sapiens,hesrt,test
+GSE313919,4,448977,4,Xenium,Homo sapiens,sda-all,train
+GSE314035,2,1371870,2,Visium HD,Macaca mulatta,sda-all,train
+GSE314260,4,490608,0,Visium HD,Homo sapiens,sda-all,train
+GSE314325,7,2612234,0,MERFISH/MERSCOPE,Mus musculus,sda-all,test
+GSE314531,9,2197227,9,Xenium,Mus musculus,sda-all,train
+GSE314851,16,21360,16,Visium,Homo sapiens,hesrt,train
+GSE314910,12,42747,12,Visium,Homo sapiens,hesrt,train
+GSE315151,2,10537,0,Stereo-seq,Rattus norvegicus,sda-all,train
+GSE315233,2,797373,2,Visium HD,Homo sapiens,sda-all,train
+GSE315243,33,10857554,33,Xenium,Mus musculus,sda-all,train
+GSE315246,17,198145,17,Xenium,Homo sapiens,sda-all,train
+GSE315295,18,236499,18,Xenium,Mus musculus,sda-all,train
+GSE315408,5,520751,0,MERFISH/MERSCOPE,Homo sapiens,sda-all,train
+GSE315411,5,5532357,5,Xenium,Homo sapiens,sda-all,train
+GSE315416,2,240445,0,Stereo-seq,Bos taurus,sda-all,train
+GSE315435,11,3036357,11,Xenium,Homo sapiens;Mus musculus,sda-all,train
+GSE315482,4,9681,4,Visium,Mus musculus,sda-all,train
+GSE315487,4,13193,0,Visium,Mus musculus,sda-all,train
+GSE315553,4,97985,0,Slide-seq,Homo sapiens,sda-all,val
+GSE315907,196,152752,196,CosMx,Mus musculus,sda-all,train
+GSE316346,2,1236884,2,Xenium,Mus musculus,sda-all,train
+GSE316387,15,1118184,15,Xenium,Homo sapiens,sda-all,train
+GSE316390,4,12911,4,Visium,Homo sapiens,hesrt,train
+GSE316618,2,198412,2,Visium HD,Mus musculus,hesrt,train
+GSE316662,8,2462032,8,Xenium,Mus musculus,sda-all,train
+GSE316760,2,9033,2,Visium,Homo sapiens,hesrt,val
+GSE316789,4,119170,0,Other,Mus musculus;Solanum lycopersicum,sda-all,train
+GSE316800,1,1216979,1,Xenium,Mus musculus,sda-all,train
+GSE316917,9,2277984,9,Xenium,Homo sapiens,sda-all,train
+GSE317062,4,87237,0,Stereo-seq,Rattus norvegicus,sda-all,train
+GSE317119,2,9823,0,Stereo-seq,Oryctolagus cuniculus,sda-all,train
+GSE317226,4,218510,4,Visium HD,Homo sapiens,hesrt,val
+GSE317297,2,31670,0,Slide-seq,Mus musculus,sda-all,train
+GSE317379,2,318068,2,Xenium,Homo sapiens,sda-all,val
+GSE317381,4,532331,4,Xenium,Homo sapiens,sda-all,train
+GSE317606,12,7391,12,Visium,Homo sapiens,hesrt,train
+GSE317755,6,68045,0,Stereo-seq,Ambystoma mexicanum,sda-all,test
+GSE317987,10,5578,10,Visium,Homo sapiens,sda-all,train
+GSE318039,8,19788,8,Visium,Homo sapiens,sda-all,train
+GSE318202,10,879856,10,Xenium,Mus musculus,sda-all,train
+GSE318238,3,6259,3,Visium,Homo sapiens,sda-all,train
+GSE318415,3,176013,3,Xenium,Mus musculus,sda-all,test
+GSE318507,4,1124479,4,Xenium,Mus musculus,sda-all,train
+GSE318532,2,2998,2,Visium,Mus musculus,hesrt,train
+GSE318562,22,52248,22,Visium,Homo sapiens,sda-all,train
+GSE318590,8,179924,8,CosMx,Mus musculus,sda-all,train
+GSE318726,8,19799,8,Visium,Mus musculus,hesrt,train
+GSE318797,2,519594,0,CosMx,Mus musculus,sda-all,train
+GSE318867,3,7477,3,Visium,Homo sapiens,hesrt,train
+GSE319123,1,352913,1,Xenium,Mus musculus,sda-all,train
+GSE319236,64,162968,0,Visium,Homo sapiens,sda-all,test
+GSE319277,7,17406,0,Other,Mus musculus,sda-all,train
+GSE319536,22,103011,22,Visium,Homo sapiens,sda-all,train
+GSE319617,2,834237,2,Visium HD,Homo sapiens,hesrt,train
+GSE319706,9,1035778,9,Xenium,Mus musculus,sda-all,train
+GSE319755,3,294927,3,Xenium,Homo sapiens,sda-all,train
+GSE319763,3,1024598,3,Xenium,Homo sapiens,sda-all,train
+GSE319771,18,1075488,18,Xenium,Homo sapiens,sda-all,train
+GSE319842,2,2180,2,Visium,Mus musculus,sda-all,train
+GSE319949,4,1196539,0,MERFISH/MERSCOPE,Mus musculus,sda-all,train
+GSE320041,17,284591,17,Visium;Visium HD,Homo sapiens,sda-all,train
+GSE320142,4,1285372,4,Xenium,Homo sapiens,sda-all,train
+GSE320372,5,10302,5,Visium,Mus musculus,sda-all,train
+GSE320403,1,155388,1,Xenium,Mus musculus,sda-all,train
+GSE320442,15,31304,15,Visium,Mus musculus,sda-all,test
+GSE320484,4,403920,4,Xenium,Mus musculus,sda-all,train
+GSE320505,4,7662,4,Visium,Homo sapiens,hesrt,test
+GSE321832,5,21884,5,Visium,Homo sapiens,hesrt,train
+GSE322553,7,20827,7,Visium,Homo sapiens,sda-all,train
+GSE322640,10,483645,10,Visium HD,Homo sapiens,sda-all,train
+GSE322883,4,4516,4,Visium,Homo sapiens,sda-all,train
+GSE322974,1,75396,1,Xenium,Homo sapiens,sda-all,train
+GSE323357,4,8256,4,Visium,Mus musculus,hesrt,test
+GSE324075,1,77951,0,Stereo-seq,Mus musculus,sda-all,val
+GSE324128,1,228180,1,Xenium,Mus musculus,sda-all,train
+GSE324158,1,3591,0,BMK S1000,Macaca fascicularis,sda-all,train
+GSE324268,2,906852,2,Xenium,Homo sapiens,sda-all,train
+GSE324427,2,620074,0,Visium HD,Homo sapiens,sda-all,val
+GSE324535,1,7675,0,Stereo-seq,Mus musculus,sda-all,train
+GSE324601,2,2378,2,Visium,Homo sapiens,sda-all,train
+GSE324903,1,740571,0,Slide-seq,Mus musculus,sda-all,train
+GSE324934,9,150447,9,Xenium,Homo sapiens,sda-all,val
+GSE325196,12,31236,12,Visium,Homo sapiens,sda-all,test
+GSE325253,8,1592580,8,Xenium,Mus musculus,sda-all,train
+GSE325371,4,16350,0,BMK S1000,Solanum lycopersicum,sda-all,train
+GSE325489,4,785332,4,Xenium,Homo sapiens,sda-all,train
+GSE325554,8,22096,8,Visium,Mus musculus,hesrt,train
+GSE325587,8,159648,0,CosMx,Homo sapiens,sda-all,train
+GSE325706,2,15293,2,Visium HD,Homo sapiens,sda-all,train
+GSE325755,11,13773,11,Visium,Homo sapiens,sda-all,train
+GSE325769,2,288955,0,MERFISH/MERSCOPE,Mus musculus,sda-all,train
+GSE325797,2,32130,0,MERFISH/MERSCOPE,Mus musculus,sda-all,train
+GSE325817,1,2206,1,Visium,Mus musculus,sda-all,train
+GSE325846,4,5895,0,Visium,Rattus norvegicus,sda-all,train
+GSE325861,2,140210,0,MERFISH/MERSCOPE,Homo sapiens,sda-all,test
+GSE325911,37,175192,0,Molecular Cartography,Homo sapiens;Mus musculus,sda-all,train
+GSE325935,4,1532922,4,Xenium,Homo sapiens,sda-all,train
+GSE325991,1,699798,0,Visium HD,Homo sapiens,sda-all,train
+GSE325996,2,7423,2,Visium,Mus musculus,sda-all,train
+GSE326094,1,117559,1,Visium HD,Homo sapiens,sda-all,train
+GSE326204,1,216197,1,Visium HD,Mus musculus,sda-all,test
+GSE326226,5,131875,5,Xenium,Homo sapiens,sda-all,train
+GSE326496,2,214852,0,Xenium,Mus musculus,sda-all,train
+GSE326553,4,949137,0,CosMx,Mus musculus,sda-all,val
+GSE326636,4,12501,4,Visium,Mus musculus,sda-all,train
+GSE326639,10,467579,10,Xenium,Mus musculus,sda-all,train
+GSE326660,6,682909,6,Xenium,Homo sapiens,sda-all,test
+GSE326743,7,2207593,7,Xenium,Homo sapiens,sda-all,train
+GSE326837,9,612602,9,Xenium,Homo sapiens,sda-all,train
+GSE326903,3,7700,3,Visium,Homo sapiens,sda-all,test
+GSE326904,2,423385,0,CosMx,Mus musculus,sda-all,train
+GSE327056,4,18075,4,Visium,Homo sapiens,sda-all,test
+GSE327095,2,7264,0,Visium,Mus musculus,sda-all,train
+GSE327129,2,58363,2,Visium HD,Mus musculus,sda-all,train
+GSE327147,7,1136837,0,MERFISH/MERSCOPE,Mus musculus,sda-all,val
+GSE327192,15,8147266,0,MERFISH/MERSCOPE,Homo sapiens,sda-all,train
+GSE327284,2,227556,2,Visium HD,Mus musculus,sda-all,train
+GSE327347,7,630476,7,Xenium,Homo sapiens,sda-all,test
+GSE327406,1,6113,0,Other,Mus musculus,sda-all,train
+GSE327441,4,12745,4,Visium,Homo sapiens,sda-all,train
+GSE327581,5,738722,0,CosMx,Mus musculus,sda-all,train
+GSE327709,9,55965,0,MERFISH/MERSCOPE,Arabidopsis thaliana,sda-all,train
+GSE327796,4,1955,4,Visium,Ciona robusta,sda-all,train
+GSE327879,2,76973,0,CosMx,Homo sapiens,sda-all,train
+GSE327901,1,51540,1,Xenium,Branchiostoma floridae,sda-all,train
+GSE328169,1,640573,0,Xenium,Mus musculus,sda-all,test
+GSE328422,6,1193163,6,Xenium,Homo sapiens,sda-all,train
+GSE328448,4,156273,0,Stereo-seq,Mus musculus,sda-all,train
+GSE328460,1,118109,0,CosMx,Homo sapiens,sda-all,train
+GSE328481,11,1098740,0,Stereo-seq,Homo sapiens,sda-all,train
+GSE328700,12,294302,12,Xenium,Mus musculus,sda-all,train
+GSE328931,11,2532998,11,Xenium,Mus musculus,sda-all,train
+GSE329112,69,619603,0,Slide-seq,Mus musculus,sda-all,val
+GSE329229,1,225376,1,Xenium,Mus musculus,sda-all,train
+GSE329415,6,754899,6,Xenium,Mus musculus,sda-all,train
+GSE329718,120,1369223,0,MERFISH/MERSCOPE,Mus musculus,sda-all,train
+GSE330153,4,10940,4,Visium,Mus musculus,sda-all,val
+GSE330163,2,451777,0,Visium HD,Homo sapiens,sda-all,train
+GSE330224,303,1334604,303,Visium,Homo sapiens,sda-all,train
+GSE330686,4,262546,4,Xenium,Mus musculus,sda-all,train
+GSE330849,2,258589,0,MERFISH/MERSCOPE,Mus musculus,sda-all,train
+GSE330886,1,357577,1,Xenium,Homo sapiens,sda-all,train
+GSE330953,51,1868983,26,Xenium,Homo sapiens,sda-all,train
+GSE331133,2,938243,2,Visium HD,Homo sapiens,sda-all,train
+GSE331225,2,746839,0,Visium HD,Mus musculus,sda-all,train
+GSE331286,4,7987,4,Visium,Mus musculus,sda-all,train
+GSE331374,4,11000,4,Visium,Homo sapiens,sda-all,train
+GSE331446,5,12615,4,Visium,Homo sapiens,sda-all,val
+GSE331531,7,4043757,7,Xenium,Homo sapiens,sda-all,train
+GSE332563,12,58637,12,Visium,Homo sapiens,sda-all,train
+GSE332601,4,13480,4,Visium,Mus musculus,sda-all,train
+GSE332618,15,2335708,15,Visium HD,Homo sapiens,sda-all,val
+GSE332731,2,697404,2,Visium HD,Mus musculus,sda-all,train
+GSE332850,4,56135,0,Xenium,Homo sapiens,sda-all,train
+GSE333244,4,518635,4,Visium HD,Homo sapiens,sda-all,train
+GSE333401,13,22323,13,Visium,Mus musculus,sda-all,val
+GSE333479,21,1272693,0,Stereo-seq,Mus musculus,sda-all,train
+GSE333529,4,3454,4,Visium,Homo sapiens,sda-all,train
+GSE333617,4,10756,4,Visium,Homo sapiens,sda-all,train
+GSE333685,1,49909,1,Xenium,Mus musculus,sda-all,train
+GSE333693,1,796801,0,Stereo-seq,Rattus norvegicus,sda-all,train
+GSE333735,3,3530,0,Other,Gallus gallus,sda-all,train
+GSE333737,12,4482408,0,MERFISH/MERSCOPE,Homo sapiens,sda-all,train
+GSE333851,1,2498,0,Other,Homo sapiens,sda-all,train
+GSE334067,32,172328,32,Visium,Mus musculus,sda-all,train
+GSE334308,2,353877,2,Visium HD,Homo sapiens,sda-all,train
+GSE334323,6,25735,6,Visium,Homo sapiens,sda-all,train
+GSE334364,1,544026,1,Xenium,Mus musculus,sda-all,test
+GSE334433,6,7109,6,Visium,Ambystoma mexicanum,sda-all,train
+GSE334924,1,205569,1,Visium HD,Homo sapiens,sda-all,train
+GSE334959,13,79165,13,Visium,Mus musculus,sda-all,test
+GSE335102,1,34961,0,Stereo-seq,Mus musculus,sda-all,train
+GSE335126,2,439780,1,Xenium,Mus musculus,sda-all,train
+GSE335181,2,9637,2,Visium,Homo sapiens,sda-all,train
+GSE335211,4,1343281,4,Xenium,Mus musculus,sda-all,train
+GSE335275,6,715725,6,Xenium,Homo sapiens,sda-all,test
+GSE335345,1,1916,0,Visium,Mus musculus,sda-all,train
+GSE335533,2,3910,2,Visium,Mus musculus,sda-all,train
+GSE335552,4,646711,4,Xenium,Homo sapiens,sda-all,train
+GSE335564,1,784963,0,Other,Astyanax mexicanus,sda-all,train
+GSE335592,2,20000,0,Other,Homo sapiens,sda-all,val
+GSE335624,1,45280,1,Xenium,Homo sapiens,sda-all,train
+GSE335702,8,1221458,8,Visium;Visium HD,Mus musculus,sda-all,train
+GSE335777,1,3600,1,Visium,Mus musculus,sda-all,train
+GSE335898,15,1185287,15,Xenium,Homo sapiens,sda-all,train
+GSE335962,6,282288,0,Xenium,Homo sapiens,sda-all,train
+GSE336196,10,3192967,10,Xenium,Mus musculus,sda-all,train
+GSE336209,4,1374499,4,Xenium,Mus musculus,sda-all,train
+GSE336556,9,368732,9,Xenium,Homo sapiens,sda-all,train
+GSE336633,16,9670665,0,Visium HD,Macaca fascicularis,sda-all,val
+GSE336853,8,1470701,0,CosMx,Homo sapiens,sda-all,train
+GSE336890,9,359037,7,Xenium,Homo sapiens,sda-all,train
+GSE337131,2,1375141,0,Visium HD,Homo sapiens,sda-all,val
+GSE337270,16,1564613,16,Xenium,Mus musculus,sda-all,train
+GSE337336,16,65717,0,CosMx,Homo sapiens,sda-all,val
+GSE337521,2,195696,2,Visium HD,Homo sapiens,sda-all,test
+GSE337537,2,4187,2,Visium,Mus musculus,sda-all,train
+GSE337578,1,30560,0,Other,Mus musculus,sda-all,train
+GSE337623,4,19629,4,Visium,Mus musculus,sda-all,train
+GSE337859,2,8937,1,Visium,Homo sapiens,sda-all,train
+GSE337933,1,351037,0,CosMx,Mus musculus,sda-all,val
+GSE338104,6,2356180,6,Xenium,Rattus norvegicus,sda-all,train
+GSE338249,5,109372,0,Other,Nymphaea colorata,sda-all,test
+GSE338404,2,5280,2,Visium,Mus musculus,sda-all,test
+GSE338506,1,4992,0,Visium,Homo sapiens,sda-all,train
+GSE338525,16,20435,16,Visium,Homo sapiens,sda-all,train
+GSE338671,3,151358,3,Xenium,Homo sapiens,sda-all,train
+GSE339304,1,120696,0,CosMx,Homo sapiens,sda-all,train
+GSE339455,4,4027,4,Visium,Homo sapiens,sda-all,val
+GSE341169,8,1290671,8,Xenium,Leucoraja erinaceus,sda-all,train
+GSE341225,12,35132,12,Visium,Homo sapiens,sda-all,test
+GSE341250,2,150738,2,Xenium,Homo sapiens,sda-all,train
+GSE341382,2,1137133,2,Visium HD,Mus musculus,sda-all,train
+GSE341607,18,43567,18,Visium,Macaca mulatta,sda-all,train
+GSE341914,6,66912,0,Stereo-seq,Mus musculus,sda-all,test
+GSE341918,4,162029,0,Slide-seq,Mus musculus,sda-all,train
+GSE341984,12,2218221,12,Xenium,Mus musculus,sda-all,train
+GSE342202,4,230896,0,Xenium,Mus musculus,sda-all,train
+GSE342289,4,1033862,4,Xenium,Homo sapiens,sda-all,train
+GSE342343,1,283108,1,Xenium,Mus musculus,sda-all,train
+GSE342671,1,4609,1,Visium,Canis lupus familiaris,sda-all,val
+GSE342687,6,19316,6,Visium,Homo sapiens,sda-all,train
+GSE342703,4,57600,4,Visium HD,Homo sapiens,sda-all,train
+GSE342709,51,227303,51,Visium,Homo sapiens,sda-all,train
+GSE342738,5,2988605,5,Visium HD,Homo sapiens,sda-all,train
+GSE342913,5,714504,5,Xenium,Mus musculus,sda-all,train
+GSE343063,5,1462971,4,Xenium,Homo sapiens,sda-all,train
+GSE343350,2,432544,2,Xenium,Homo sapiens,sda-all,train
+GSE343400,2,341052,0,Stereo-seq,Mus musculus,sda-all,train
+GSE343862,6,22870,6,Visium,Mus musculus,sda-all,val
+GSE344364,1,117940,0,Stereo-seq,Daucus carota,sda-all,train
+GSE344506,32,244045,32,Visium,Homo sapiens,sda-all,train
+GSE344584,8,5765161,8,Xenium,Homo sapiens,sda-all,train
+GSE344594,4,17069,0,Visium,Canis lupus familiaris,sda-all,val
+GSE344692,4,349251,0,MERFISH/MERSCOPE,Mus musculus,sda-all,train
+GSE344748,4,149645,0,Slide-seq,Mus musculus,sda-all,val
+GSE344969,2,6138,2,Visium,Homo sapiens,sda-all,train
+GSE345289,2,97539,2,Xenium,Mus musculus,sda-all,val
+GSE345302,8,3913730,8,Xenium,Homo sapiens,sda-all,train
+GSE345359,4,1955941,1,Xenium,Mesocricetus auratus,sda-all,train
+GSE345643,6,625305,6,Xenium,Homo sapiens,sda-all,test
+GSE345644,1,89585,1,Xenium,Homo sapiens,sda-all,val
+GSE345691,8,1239260,8,Xenium,Homo sapiens,sda-all,train
+GSE346090,5,24830,5,Visium,Homo sapiens,sda-all,test
+GSE346722,2,4015659,2,Xenium,Macaca fascicularis,sda-all,val
+GSE347650,16,50752,16,Visium,Mus musculus,sda-all,test
+GSE348514,2,373511,2,Xenium,Mus musculus,sda-all,train
+GSE348584,15,1901045,15,Xenium,Homo sapiens,sda-all,test

catalog/summary.json

@@ -0,0 +1,82 @@
+{
+ "release_id": "sda-unified-20261010-v3",
+ "contract": "sda-release-sample-1",
+ "samples": 12163,
+ "series_published": 1265,
+ "series_all": 1333,
+ "observations": 635240170,
+ "by_pipeline": {
+  "sda-all": 7777,
+  "hesrt": 4386
+ },
+ "by_platform": {
+  "Visium": 6512,
+  "Xenium": 1785,
+  "ST (legacy)": 1098,
+  "CosMx": 1092,
+  "MERFISH/MERSCOPE": 463,
+  "Slide-seq": 380,
+  "Other": 299,
+  "Visium HD": 223,
+  "Stereo-seq": 208,
+  "Molecular Cartography": 47,
+  "DBiT-seq": 32,
+  "BMK S1000": 24
+ },
+ "by_split": {
+  "train": 9249,
+  "test": 1598,
+  "val": 1316
+ },
+ "with_image": 8211,
+ "image_stain": {
+  "H&E": 5263,
+  "fluorescence: DAPI": 1423,
+  "H&E-like (heuristic)": 871,
+  "fluorescence: CosMx multichannel composite": 256,
+  "blue bright-field stain (heuristic)": 125,
+  "grayscale bright-field (heuristic)": 59,
+  "fluorescence: multichannel (heuristic)": 45,
+  "fluorescence: immunofluorescence": 44,
+  "fluorescence: blue (heuristic)": 43,
+  "other bright-field stain (heuristic)": 19,
+  "fluorescence: single channel, grayscale (heuristic)": 14,
+  "undetermined": 12,
+  "fluorescence: magenta (heuristic)": 9,
+  "fluorescence: green (heuristic)": 9,
+  "toluidine blue": 7,
+  "fluorescence: red (heuristic)": 6,
+  "other bright-field stain (see review notes)": 5,
+  "fluorescence: yellow (heuristic)": 1
+ },
+ "image_registration": {
+  "HESRT_HUMAN_REVIEW": 4386,
+  "VERIFIED": 3472,
+  "(none)": 3237,
+  "ABSENT": 570,
+  "UNRESOLVED": 190,
+  "FAILED": 135,
+  "WITHHELD": 98,
+  "PARTIAL": 75
+ },
+ "coordinate_units": {
+  "pixel": 5795,
+  "um": 5175,
+  "native_grid": 830,
+  "unstated": 363
+ },
+ "um_basis": {
+  "verified": 5151,
+  "platform_constant": 4236,
+  "unresolved": 2752,
+  "declared_unverified": 24
+ },
+ "with_spatial_um": 4236,
+ "expression_state": {
+  "counts": 11738,
+  "unknown": 417,
+  "non-integer": 8
+ },
+ "reviewed": 4084,
+ "qc_flagged": 405
+}