assayformer / config.json
cnedwards's picture
AssayFormer: final GRPO checkpoint from the AssayLoop paper
61cdabd verified
Raw
History Blame Contribute Delete
1.56 kB
{
"arch": {
"vocab_size": 24217,
"text_dim": 1536,
"d_model": 384,
"d_gene": 10,
"d_hit": 64,
"nhead": 2,
"num_layers": 3,
"dim_feedforward": 1024,
"dropout": 0.0,
"encoder_type": "transformer",
"bert_model": "answerdotai/ModernBERT-base",
"freeze_bert": false,
"bert_pool": "cls",
"text_max_tokens": 2048,
"use_description": true,
"freeze_factors": false,
"disable_gene_bias": false,
"variational": false
},
"text_backend": "azure",
"text_model": "text-embedding-3-small",
"encoder_type": "transformer",
"bert_model": "answerdotai/ModernBERT-base",
"bert_pool": "cls",
"text_max_tokens": 2048,
"rl": {
"init_checkpoint": "output/rankers/gf-bpmf-train-hits",
"from_scratch": false,
"aux_hit_coef": 0.0,
"disable_gene_bias": false,
"epochs": 100,
"group_size": 8,
"n_steps": 10,
"batch_size": 100,
"gamma": 1.0,
"temperature": 1.0,
"kl_coef": 0.0,
"ent_coef": 0.01,
"terminal_coef": 1.0,
"reward_mode": "context_delta",
"ctx_reset_epochs": 25,
"adv_std_floor": 1e-06,
"adv_clip": 0.0,
"lr": 1e-05,
"bert_lr": 1e-06,
"rl_max_context": 1024,
"seed": 19,
"train_screen_set": "public_train",
"eval_screen_set": "public_validation",
"wandb_group": null,
"wandb_tags": [
"rl",
"gf",
"full_genome"
],
"warm_start": {
"glm_train": null,
"n": 0,
"eval_dir": null,
"eval_prefix": "sweep-ad6af08f-",
"eval_warm_n": 0
}
}
}